Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02982

Experiment: M9 plate, 1:1 coculture with Chryseobacterium proteolyticum TBS_027

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02980 and MPMX20_02981 are separated by 129 nucleotidesMPMX20_02981 and MPMX20_02982 are separated by 207 nucleotidesMPMX20_02982 and MPMX20_02983 are separated by 96 nucleotides MPMX20_02980: MPMX20_02980 - Glycine cleavage system transcriptional activator, at 3,113,693 to 3,114,463 _02980 MPMX20_02981: MPMX20_02981 - hypothetical protein, at 3,114,593 to 3,114,778 _02981 MPMX20_02982: MPMX20_02982 - HTH-type transcriptional regulator cbl, at 3,114,986 to 3,115,936 _02982 MPMX20_02983: MPMX20_02983 - HTH-type transcriptional regulator ArgP, at 3,116,033 to 3,116,950 _02983 Position (kb) 3114 3115 3116Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7 8 9 10at 3114.019 kb on + strand, within MPMX20_02980at 3114.020 kb on - strand, within MPMX20_02980at 3114.027 kb on - strand, within MPMX20_02980at 3114.057 kb on - strand, within MPMX20_02980at 3114.066 kb on + strand, within MPMX20_02980at 3114.074 kb on - strand, within MPMX20_02980at 3114.084 kb on + strand, within MPMX20_02980at 3114.089 kb on + strand, within MPMX20_02980at 3114.097 kb on - strand, within MPMX20_02980at 3114.178 kb on + strand, within MPMX20_02980at 3114.186 kb on - strand, within MPMX20_02980at 3114.186 kb on - strand, within MPMX20_02980at 3114.186 kb on - strand, within MPMX20_02980at 3114.194 kb on - strand, within MPMX20_02980at 3114.194 kb on - strand, within MPMX20_02980at 3114.210 kb on - strand, within MPMX20_02980at 3114.212 kb on - strand, within MPMX20_02980at 3114.216 kb on - strand, within MPMX20_02980at 3114.216 kb on - strand, within MPMX20_02980at 3114.218 kb on + strand, within MPMX20_02980at 3114.218 kb on + strand, within MPMX20_02980at 3114.219 kb on + strand, within MPMX20_02980at 3114.219 kb on + strand, within MPMX20_02980at 3114.219 kb on + strand, within MPMX20_02980at 3114.224 kb on + strand, within MPMX20_02980at 3114.226 kb on - strand, within MPMX20_02980at 3114.226 kb on - strand, within MPMX20_02980at 3114.226 kb on - strand, within MPMX20_02980at 3114.227 kb on - strand, within MPMX20_02980at 3114.265 kb on - strand, within MPMX20_02980at 3114.270 kb on - strand, within MPMX20_02980at 3114.299 kb on - strand, within MPMX20_02980at 3114.346 kb on - strand, within MPMX20_02980at 3114.356 kb on - strand, within MPMX20_02980at 3114.379 kb on - strand, within MPMX20_02980at 3114.379 kb on - strand, within MPMX20_02980at 3114.379 kb on - strand, within MPMX20_02980at 3114.388 kb on + strandat 3114.388 kb on + strandat 3114.388 kb on + strandat 3114.396 kb on - strandat 3114.396 kb on - strandat 3114.396 kb on - strandat 3114.422 kb on - strandat 3114.427 kb on + strandat 3114.427 kb on + strandat 3114.427 kb on + strandat 3114.427 kb on + strandat 3114.427 kb on + strandat 3114.451 kb on + strandat 3114.451 kb on + strandat 3114.451 kb on + strandat 3114.451 kb on + strandat 3114.459 kb on - strandat 3114.485 kb on - strandat 3114.517 kb on + strandat 3114.517 kb on + strandat 3114.517 kb on + strandat 3114.517 kb on + strandat 3114.517 kb on + strandat 3114.517 kb on + strandat 3114.517 kb on + strandat 3114.517 kb on + strandat 3114.517 kb on + strandat 3114.517 kb on + strandat 3114.517 kb on + strandat 3114.517 kb on + strandat 3114.517 kb on + strandat 3114.527 kb on + strandat 3114.552 kb on + strandat 3114.552 kb on + strandat 3114.557 kb on + strandat 3114.557 kb on + strandat 3114.564 kb on + strandat 3114.564 kb on + strandat 3114.594 kb on + strandat 3114.596 kb on + strandat 3114.601 kb on + strandat 3114.610 kb on + strandat 3114.687 kb on + strand, within MPMX20_02981at 3114.697 kb on + strand, within MPMX20_02981at 3114.709 kb on + strand, within MPMX20_02981at 3114.709 kb on + strand, within MPMX20_02981at 3114.711 kb on + strand, within MPMX20_02981at 3114.713 kb on + strand, within MPMX20_02981at 3114.713 kb on + strand, within MPMX20_02981at 3114.713 kb on + strand, within MPMX20_02981at 3114.719 kb on + strand, within MPMX20_02981at 3114.753 kb on + strand, within MPMX20_02981at 3114.753 kb on + strand, within MPMX20_02981at 3114.753 kb on + strand, within MPMX20_02981at 3114.753 kb on + strand, within MPMX20_02981at 3114.860 kb on - strandat 3114.862 kb on - strandat 3114.867 kb on - strandat 3114.867 kb on - strandat 3114.867 kb on - strandat 3114.867 kb on - strandat 3114.867 kb on - strandat 3114.867 kb on - strandat 3114.885 kb on - strandat 3114.885 kb on - strandat 3114.885 kb on - strandat 3114.935 kb on - strandat 3114.940 kb on - strandat 3114.952 kb on - strandat 3114.952 kb on - strandat 3114.952 kb on - strandat 3114.952 kb on - strandat 3114.952 kb on - strandat 3114.952 kb on - strandat 3114.952 kb on - strandat 3114.952 kb on - strandat 3114.952 kb on - strandat 3114.954 kb on - strandat 3114.954 kb on - strandat 3114.975 kb on - strandat 3114.982 kb on - strandat 3114.982 kb on - strandat 3114.982 kb on - strandat 3114.983 kb on - strandat 3114.992 kb on - strandat 3114.992 kb on - strandat 3114.992 kb on - strandat 3115.020 kb on - strandat 3115.021 kb on - strandat 3115.025 kb on - strandat 3115.033 kb on - strandat 3115.035 kb on - strandat 3115.040 kb on - strandat 3115.040 kb on - strandat 3115.040 kb on - strandat 3115.040 kb on - strandat 3115.045 kb on - strandat 3115.050 kb on - strandat 3115.052 kb on - strandat 3115.067 kb on - strandat 3115.067 kb on - strandat 3115.067 kb on - strandat 3115.067 kb on - strandat 3115.067 kb on - strandat 3115.077 kb on - strandat 3115.092 kb on - strand, within MPMX20_02982at 3115.097 kb on - strand, within MPMX20_02982at 3115.112 kb on - strand, within MPMX20_02982at 3115.113 kb on - strand, within MPMX20_02982at 3115.119 kb on - strand, within MPMX20_02982at 3115.120 kb on - strand, within MPMX20_02982at 3115.125 kb on - strand, within MPMX20_02982at 3115.131 kb on - strand, within MPMX20_02982at 3115.131 kb on - strand, within MPMX20_02982at 3115.155 kb on - strand, within MPMX20_02982at 3115.169 kb on - strand, within MPMX20_02982at 3115.173 kb on - strand, within MPMX20_02982at 3115.191 kb on + strand, within MPMX20_02982at 3115.191 kb on + strand, within MPMX20_02982at 3115.199 kb on - strand, within MPMX20_02982at 3115.199 kb on - strand, within MPMX20_02982at 3115.252 kb on + strand, within MPMX20_02982at 3115.252 kb on + strand, within MPMX20_02982at 3115.260 kb on - strand, within MPMX20_02982at 3115.261 kb on + strand, within MPMX20_02982at 3115.293 kb on - strand, within MPMX20_02982at 3115.307 kb on + strand, within MPMX20_02982at 3115.342 kb on + strand, within MPMX20_02982at 3115.383 kb on - strand, within MPMX20_02982at 3115.421 kb on + strand, within MPMX20_02982at 3115.468 kb on + strand, within MPMX20_02982at 3115.476 kb on - strand, within MPMX20_02982at 3115.545 kb on + strand, within MPMX20_02982at 3115.545 kb on + strand, within MPMX20_02982at 3115.550 kb on + strand, within MPMX20_02982at 3115.550 kb on + strand, within MPMX20_02982at 3115.551 kb on + strand, within MPMX20_02982at 3115.558 kb on - strand, within MPMX20_02982at 3115.569 kb on - strand, within MPMX20_02982at 3115.569 kb on - strand, within MPMX20_02982at 3115.596 kb on + strand, within MPMX20_02982at 3115.596 kb on + strand, within MPMX20_02982at 3115.604 kb on - strand, within MPMX20_02982at 3115.604 kb on - strand, within MPMX20_02982at 3115.624 kb on - strand, within MPMX20_02982at 3115.631 kb on + strand, within MPMX20_02982at 3115.639 kb on - strand, within MPMX20_02982at 3115.639 kb on - strand, within MPMX20_02982at 3115.644 kb on - strand, within MPMX20_02982at 3115.667 kb on - strand, within MPMX20_02982at 3115.743 kb on + strand, within MPMX20_02982at 3115.832 kb on - strand, within MPMX20_02982at 3115.854 kb on + strandat 3115.854 kb on + strandat 3115.882 kb on + strandat 3115.884 kb on - strandat 3115.888 kb on + strandat 3115.888 kb on + strandat 3115.888 kb on + strandat 3115.888 kb on + strandat 3115.890 kb on - strandat 3115.890 kb on - strandat 3115.890 kb on - strandat 3115.922 kb on - strandat 3115.932 kb on - strandat 3115.956 kb on + strandat 3115.978 kb on + strandat 3115.978 kb on + strandat 3116.086 kb on - strandat 3116.095 kb on - strandat 3116.098 kb on + strandat 3116.113 kb on + strandat 3116.121 kb on - strandat 3116.139 kb on + strand, within MPMX20_02983at 3116.139 kb on + strand, within MPMX20_02983at 3116.147 kb on - strand, within MPMX20_02983at 3116.162 kb on + strand, within MPMX20_02983at 3116.248 kb on + strand, within MPMX20_02983at 3116.251 kb on - strand, within MPMX20_02983at 3116.256 kb on - strand, within MPMX20_02983at 3116.261 kb on + strand, within MPMX20_02983at 3116.344 kb on - strand, within MPMX20_02983at 3116.359 kb on - strand, within MPMX20_02983at 3116.369 kb on - strand, within MPMX20_02983at 3116.410 kb on + strand, within MPMX20_02983at 3116.422 kb on + strand, within MPMX20_02983at 3116.422 kb on + strand, within MPMX20_02983at 3116.422 kb on + strand, within MPMX20_02983at 3116.430 kb on - strand, within MPMX20_02983at 3116.448 kb on + strand, within MPMX20_02983at 3116.451 kb on - strand, within MPMX20_02983at 3116.458 kb on - strand, within MPMX20_02983at 3116.513 kb on - strand, within MPMX20_02983at 3116.513 kb on - strand, within MPMX20_02983at 3116.525 kb on - strand, within MPMX20_02983at 3116.554 kb on + strand, within MPMX20_02983at 3116.562 kb on - strand, within MPMX20_02983at 3116.567 kb on + strand, within MPMX20_02983at 3116.613 kb on + strand, within MPMX20_02983at 3116.621 kb on - strand, within MPMX20_02983at 3116.621 kb on - strand, within MPMX20_02983at 3116.731 kb on + strand, within MPMX20_02983at 3116.731 kb on + strand, within MPMX20_02983at 3116.731 kb on + strand, within MPMX20_02983at 3116.849 kb on - strand, within MPMX20_02983at 3116.871 kb on + strandat 3116.927 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Chryseobacterium proteolyticum TBS_027
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3,114,019 + MPMX20_02980 0.42 +0.3
3,114,020 - MPMX20_02980 0.42 -0.1
3,114,027 - MPMX20_02980 0.43 -0.7
3,114,057 - MPMX20_02980 0.47 -0.8
3,114,066 + MPMX20_02980 0.48 +0.4
3,114,074 - MPMX20_02980 0.49 +0.5
3,114,084 + MPMX20_02980 0.51 +0.4
3,114,089 + MPMX20_02980 0.51 -0.6
3,114,097 - MPMX20_02980 0.52 -1.8
3,114,178 + MPMX20_02980 0.63 +0.3
3,114,186 - MPMX20_02980 0.64 +1.4
3,114,186 - MPMX20_02980 0.64 +0.1
3,114,186 - MPMX20_02980 0.64 -1.1
3,114,194 - MPMX20_02980 0.65 +0.2
3,114,194 - MPMX20_02980 0.65 +0.7
3,114,210 - MPMX20_02980 0.67 -0.3
3,114,212 - MPMX20_02980 0.67 +1.4
3,114,216 - MPMX20_02980 0.68 +0.8
3,114,216 - MPMX20_02980 0.68 -1.4
3,114,218 + MPMX20_02980 0.68 +1.5
3,114,218 + MPMX20_02980 0.68 +1.5
3,114,219 + MPMX20_02980 0.68 -1.4
3,114,219 + MPMX20_02980 0.68 -1.3
3,114,219 + MPMX20_02980 0.68 +0.8
3,114,224 + MPMX20_02980 0.69 -0.3
3,114,226 - MPMX20_02980 0.69 -0.8
3,114,226 - MPMX20_02980 0.69 -1.0
3,114,226 - MPMX20_02980 0.69 -0.6
3,114,227 - MPMX20_02980 0.69 +0.1
3,114,265 - MPMX20_02980 0.74 +1.1
3,114,270 - MPMX20_02980 0.75 -0.5
3,114,299 - MPMX20_02980 0.79 -0.7
3,114,346 - MPMX20_02980 0.85 +1.0
3,114,356 - MPMX20_02980 0.86 +4.3
3,114,379 - MPMX20_02980 0.89 +1.0
3,114,379 - MPMX20_02980 0.89 +0.4
3,114,379 - MPMX20_02980 0.89 +1.0
3,114,388 + +0.0
3,114,388 + +0.9
3,114,388 + +0.4
3,114,396 - +0.4
3,114,396 - -0.2
3,114,396 - +0.7
3,114,422 - -1.2
3,114,427 + +0.7
3,114,427 + -0.8
3,114,427 + +0.5
3,114,427 + +0.7
3,114,427 + +1.7
3,114,451 + +1.2
3,114,451 + -2.5
3,114,451 + +3.7
3,114,451 + +0.6
3,114,459 - +2.7
3,114,485 - +0.7
3,114,517 + -0.7
3,114,517 + -1.7
3,114,517 + -0.5
3,114,517 + -1.6
3,114,517 + -0.2
3,114,517 + +0.7
3,114,517 + -0.1
3,114,517 + -0.7
3,114,517 + +1.5
3,114,517 + -0.6
3,114,517 + -0.9
3,114,517 + -0.6
3,114,517 + -0.1
3,114,527 + -0.1
3,114,552 + -0.7
3,114,552 + -0.4
3,114,557 + -0.3
3,114,557 + -0.3
3,114,564 + -0.3
3,114,564 + +0.4
3,114,594 + +1.7
3,114,596 + +0.4
3,114,601 + -0.1
3,114,610 + +1.7
3,114,687 + MPMX20_02981 0.51 -0.3
3,114,697 + MPMX20_02981 0.56 -1.7
3,114,709 + MPMX20_02981 0.62 +0.0
3,114,709 + MPMX20_02981 0.62 -0.6
3,114,711 + MPMX20_02981 0.63 -1.5
3,114,713 + MPMX20_02981 0.65 +0.9
3,114,713 + MPMX20_02981 0.65 +0.7
3,114,713 + MPMX20_02981 0.65 +0.5
3,114,719 + MPMX20_02981 0.68 +0.7
3,114,753 + MPMX20_02981 0.86 -1.4
3,114,753 + MPMX20_02981 0.86 +1.7
3,114,753 + MPMX20_02981 0.86 +2.7
3,114,753 + MPMX20_02981 0.86 -0.4
3,114,860 - -0.5
3,114,862 - -1.7
3,114,867 - -2.3
3,114,867 - +1.1
3,114,867 - +1.7
3,114,867 - -0.7
3,114,867 - -0.9
3,114,867 - +0.1
3,114,885 - -0.6
3,114,885 - -0.8
3,114,885 - +2.1
3,114,935 - +1.7
3,114,940 - +2.3
3,114,952 - +1.0
3,114,952 - -0.7
3,114,952 - -0.1
3,114,952 - -0.5
3,114,952 - -0.5
3,114,952 - -0.4
3,114,952 - -1.6
3,114,952 - -0.7
3,114,952 - -1.7
3,114,954 - -0.4
3,114,954 - -0.6
3,114,975 - -0.9
3,114,982 - -2.3
3,114,982 - +1.7
3,114,982 - +0.6
3,114,983 - +1.7
3,114,992 - -0.3
3,114,992 - -0.2
3,114,992 - +2.7
3,115,020 - +0.1
3,115,021 - -0.2
3,115,025 - -3.1
3,115,033 - +0.1
3,115,035 - +1.7
3,115,040 - -1.1
3,115,040 - -2.0
3,115,040 - -0.2
3,115,040 - -0.4
3,115,045 - +0.4
3,115,050 - -0.7
3,115,052 - -0.1
3,115,067 - -0.4
3,115,067 - +2.2
3,115,067 - +0.1
3,115,067 - -0.0
3,115,067 - +0.1
3,115,077 - +10.5
3,115,092 - MPMX20_02982 0.11 +0.2
3,115,097 - MPMX20_02982 0.12 +0.8
3,115,112 - MPMX20_02982 0.13 +1.1
3,115,113 - MPMX20_02982 0.13 -0.3
3,115,119 - MPMX20_02982 0.14 +0.1
3,115,120 - MPMX20_02982 0.14 +0.4
3,115,125 - MPMX20_02982 0.15 +0.3
3,115,131 - MPMX20_02982 0.15 +1.0
3,115,131 - MPMX20_02982 0.15 -1.3
3,115,155 - MPMX20_02982 0.18 +3.4
3,115,169 - MPMX20_02982 0.19 +0.7
3,115,173 - MPMX20_02982 0.20 -1.2
3,115,191 + MPMX20_02982 0.22 +1.4
3,115,191 + MPMX20_02982 0.22 -1.3
3,115,199 - MPMX20_02982 0.22 +2.1
3,115,199 - MPMX20_02982 0.22 +0.1
3,115,252 + MPMX20_02982 0.28 +0.8
3,115,252 + MPMX20_02982 0.28 +3.3
3,115,260 - MPMX20_02982 0.29 +0.5
3,115,261 + MPMX20_02982 0.29 +0.5
3,115,293 - MPMX20_02982 0.32 +1.7
3,115,307 + MPMX20_02982 0.34 +0.4
3,115,342 + MPMX20_02982 0.37 -2.1
3,115,383 - MPMX20_02982 0.42 +1.7
3,115,421 + MPMX20_02982 0.46 +0.2
3,115,468 + MPMX20_02982 0.51 +0.4
3,115,476 - MPMX20_02982 0.52 -0.3
3,115,545 + MPMX20_02982 0.59 +2.1
3,115,545 + MPMX20_02982 0.59 +0.4
3,115,550 + MPMX20_02982 0.59 +1.4
3,115,550 + MPMX20_02982 0.59 -0.2
3,115,551 + MPMX20_02982 0.59 -0.7
3,115,558 - MPMX20_02982 0.60 +0.0
3,115,569 - MPMX20_02982 0.61 +0.5
3,115,569 - MPMX20_02982 0.61 -0.7
3,115,596 + MPMX20_02982 0.64 -1.0
3,115,596 + MPMX20_02982 0.64 -1.1
3,115,604 - MPMX20_02982 0.65 +1.7
3,115,604 - MPMX20_02982 0.65 +0.8
3,115,624 - MPMX20_02982 0.67 +0.1
3,115,631 + MPMX20_02982 0.68 -0.9
3,115,639 - MPMX20_02982 0.69 -0.5
3,115,639 - MPMX20_02982 0.69 +3.0
3,115,644 - MPMX20_02982 0.69 -0.4
3,115,667 - MPMX20_02982 0.72 -0.4
3,115,743 + MPMX20_02982 0.80 +0.9
3,115,832 - MPMX20_02982 0.89 +1.5
3,115,854 + +1.1
3,115,854 + -0.7
3,115,882 + -0.1
3,115,884 - -0.5
3,115,888 + +0.4
3,115,888 + -1.2
3,115,888 + -0.1
3,115,888 + +0.6
3,115,890 - -0.4
3,115,890 - +1.1
3,115,890 - +0.9
3,115,922 - +0.1
3,115,932 - -0.0
3,115,956 + -0.9
3,115,978 + -0.7
3,115,978 + +0.5
3,116,086 - +0.3
3,116,095 - +0.7
3,116,098 + +0.6
3,116,113 + +0.1
3,116,121 - +1.1
3,116,139 + MPMX20_02983 0.12 -0.1
3,116,139 + MPMX20_02983 0.12 -0.1
3,116,147 - MPMX20_02983 0.12 +0.5
3,116,162 + MPMX20_02983 0.14 +1.1
3,116,248 + MPMX20_02983 0.23 -1.5
3,116,251 - MPMX20_02983 0.24 +0.3
3,116,256 - MPMX20_02983 0.24 -0.4
3,116,261 + MPMX20_02983 0.25 -0.7
3,116,344 - MPMX20_02983 0.34 +2.7
3,116,359 - MPMX20_02983 0.36 +0.2
3,116,369 - MPMX20_02983 0.37 -0.9
3,116,410 + MPMX20_02983 0.41 -0.3
3,116,422 + MPMX20_02983 0.42 -1.9
3,116,422 + MPMX20_02983 0.42 -1.7
3,116,422 + MPMX20_02983 0.42 -1.7
3,116,430 - MPMX20_02983 0.43 +0.3
3,116,448 + MPMX20_02983 0.45 +0.1
3,116,451 - MPMX20_02983 0.46 -1.9
3,116,458 - MPMX20_02983 0.46 +1.4
3,116,513 - MPMX20_02983 0.52 -1.7
3,116,513 - MPMX20_02983 0.52 -0.4
3,116,525 - MPMX20_02983 0.54 -0.6
3,116,554 + MPMX20_02983 0.57 -0.2
3,116,562 - MPMX20_02983 0.58 +0.1
3,116,567 + MPMX20_02983 0.58 +0.1
3,116,613 + MPMX20_02983 0.63 -0.5
3,116,621 - MPMX20_02983 0.64 -1.6
3,116,621 - MPMX20_02983 0.64 -1.1
3,116,731 + MPMX20_02983 0.76 +0.2
3,116,731 + MPMX20_02983 0.76 -0.8
3,116,731 + MPMX20_02983 0.76 +0.4
3,116,849 - MPMX20_02983 0.89 -0.3
3,116,871 + +0.7
3,116,927 + -0.1

Or see this region's nucleotide sequence