Strain Fitness in Erwinia amylovora T8 around OLJFJH_18645

Experiment: Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-1
3,907,961	+				-2.3
3,907,962	-				-0.7
3,908,051	-				-0.0
3,908,051	-				-0.6
3,908,099	+				-0.5
3,908,099	+				-0.7
3,908,099	+				-0.9
3,908,100	-				-1.5
3,908,100	-				+1.5
3,908,100	-				-0.7
3,908,100	-				-0.8
3,908,100	-				-0.4
3,908,112	+				-0.2
3,908,112	+				-0.3
3,908,113	-				-1.3
3,908,260	-		OLJFJH_18640	0.26	-1.0
3,908,262	+		OLJFJH_18640	0.26	-0.5
3,908,262	+		OLJFJH_18640	0.26	-0.9
3,908,263	-		OLJFJH_18640	0.26	-0.4
3,908,286	-		OLJFJH_18640	0.29	-1.4
3,908,404	+		OLJFJH_18640	0.45	-1.0
3,908,537	-		OLJFJH_18640	0.63	-1.0
3,908,851	+				-0.0
3,908,851	+				+0.4
3,908,855	-				-3.3
3,908,887	+				-1.3
3,908,887	+				-1.1
3,908,887	+				-1.0
3,908,887	+				-2.6
3,908,887	+				-1.2
3,908,888	-				-0.8
3,908,888	-				-1.9
3,908,888	-				-2.6
3,909,021	+				-2.1
3,909,021	+				-1.2
3,909,021	+				-3.0
3,909,021	+				-2.8
3,909,022	-				-1.2
3,909,024	+				-1.5
3,909,024	+				-0.6
3,909,024	+				-2.0
3,909,024	+				-2.0
3,909,025	-				-2.6
3,909,025	-				-2.4
3,909,025	-				-1.9
3,909,025	-				-2.6
3,909,025	-				-1.6
3,909,025	-				-2.7
3,909,025	-				-0.5
3,909,025	-				-0.8
3,909,154	+		OLJFJH_18645	0.19	-0.7
3,909,166	-		OLJFJH_18645	0.20	-2.5
3,909,166	-		OLJFJH_18645	0.20	-1.6
3,909,172	+		OLJFJH_18645	0.20	-2.0
3,909,173	-		OLJFJH_18645	0.21	-1.6
3,909,173	-		OLJFJH_18645	0.21	-2.3
3,909,173	-		OLJFJH_18645	0.21	-2.1
3,909,185	+		OLJFJH_18645	0.21	-1.3
3,909,186	-		OLJFJH_18645	0.21	-2.0
3,909,205	+		OLJFJH_18645	0.23	-1.6
3,909,205	+		OLJFJH_18645	0.23	-2.4
3,909,205	+		OLJFJH_18645	0.23	-3.8
3,909,205	+		OLJFJH_18645	0.23	-2.3
3,909,206	-		OLJFJH_18645	0.23	-0.1
3,909,207	+		OLJFJH_18645	0.23	-2.1
3,909,207	+		OLJFJH_18645	0.23	-2.7
3,909,207	+		OLJFJH_18645	0.23	-2.4
3,909,207	+		OLJFJH_18645	0.23	-2.7
3,909,207	+		OLJFJH_18645	0.23	-1.4
3,909,207	+		OLJFJH_18645	0.23	-3.1
3,909,208	-		OLJFJH_18645	0.23	-1.9
3,909,208	-		OLJFJH_18645	0.23	-0.5
3,909,211	+		OLJFJH_18645	0.23	-1.5
3,909,212	-		OLJFJH_18645	0.23	-1.9
3,909,232	-		OLJFJH_18645	0.25	-1.8
3,909,240	+		OLJFJH_18645	0.25	-1.4
3,909,261	-		OLJFJH_18645	0.27	-1.7
3,909,263	+		OLJFJH_18645	0.27	-1.4
3,909,264	-		OLJFJH_18645	0.27	-0.9
3,909,264	-		OLJFJH_18645	0.27	-0.8
3,909,264	-		OLJFJH_18645	0.27	-1.7
3,909,264	-		OLJFJH_18645	0.27	-2.3
3,909,266	+		OLJFJH_18645	0.27	-0.9
3,909,289	-		OLJFJH_18645	0.29	-2.4
3,909,488	-		OLJFJH_18645	0.43	-1.7
3,909,489	+		OLJFJH_18645	0.43	-1.5
3,909,489	+		OLJFJH_18645	0.43	-2.3
3,909,490	-		OLJFJH_18645	0.43	-1.6
3,909,592	+		OLJFJH_18645	0.51	-3.4
3,909,592	+		OLJFJH_18645	0.51	-1.5
3,909,593	-		OLJFJH_18645	0.51	-2.3
3,909,644	-		OLJFJH_18645	0.55	-1.7
3,909,741	+		OLJFJH_18645	0.62	-2.2
3,909,741	+		OLJFJH_18645	0.62	-2.0
3,909,741	+		OLJFJH_18645	0.62	-1.8
3,909,741	+		OLJFJH_18645	0.62	-1.4
3,909,741	+		OLJFJH_18645	0.62	-1.5
3,909,742	-		OLJFJH_18645	0.62	-2.4
3,909,801	+		OLJFJH_18645	0.66	-1.3
3,909,814	+		OLJFJH_18645	0.67	-2.8
3,909,814	+		OLJFJH_18645	0.67	-2.5
3,909,814	+		OLJFJH_18645	0.67	-2.1
3,909,814	+		OLJFJH_18645	0.67	-3.0
3,909,815	-		OLJFJH_18645	0.67	-2.1
3,909,815	-		OLJFJH_18645	0.67	-1.6
3,909,819	+		OLJFJH_18645	0.67	-1.4
3,909,820	-		OLJFJH_18645	0.67	-0.9
3,909,928	+		OLJFJH_18645	0.75	-1.3
3,909,928	+		OLJFJH_18645	0.75	-1.5
3,909,928	+		OLJFJH_18645	0.75	-2.3
3,909,929	-		OLJFJH_18645	0.75	-0.5
3,909,929	-		OLJFJH_18645	0.75	-1.6
3,909,929	-		OLJFJH_18645	0.75	-0.6
3,909,930	+		OLJFJH_18645	0.75	-1.4
3,909,931	-		OLJFJH_18645	0.75	-1.4
3,909,931	-		OLJFJH_18645	0.75	+0.6
3,909,931	-		OLJFJH_18645	0.75	-2.0
3,909,935	+		OLJFJH_18645	0.76	-0.9
3,909,936	-		OLJFJH_18645	0.76	-2.5
3,909,936	-		OLJFJH_18645	0.76	-0.4
3,909,936	-		OLJFJH_18645	0.76	-0.5
3,909,966	+		OLJFJH_18645	0.78	-2.7
3,910,006	-		OLJFJH_18645	0.81	-0.8
3,910,008	+		OLJFJH_18645	0.81	-1.9
3,910,009	-		OLJFJH_18645	0.81	-2.2
3,910,087	-		OLJFJH_18645	0.87	-0.6
3,910,105	+		OLJFJH_18645	0.88	-1.5
3,910,106	-		OLJFJH_18645	0.88	-2.2
3,910,137	+				-1.4
3,910,138	-				-0.9
3,910,267	+				-0.3
3,910,390	-		OLJFJH_18650	0.23	-0.2
3,910,393	-		OLJFJH_18650	0.24	-0.3
3,910,400	+		OLJFJH_18650	0.27	-0.5
3,910,400	+		OLJFJH_18650	0.27	+0.2
3,910,400	+		OLJFJH_18650	0.27	+0.5
3,910,400	+		OLJFJH_18650	0.27	-0.2
3,910,400	+		OLJFJH_18650	0.27	-0.5
3,910,400	+		OLJFJH_18650	0.27	-0.2
3,910,400	+		OLJFJH_18650	0.27	+0.5
3,910,401	-		OLJFJH_18650	0.27	-0.3
3,910,401	-		OLJFJH_18650	0.27	-0.5
3,910,401	-		OLJFJH_18650	0.27	-0.0
3,910,425	+		OLJFJH_18650	0.35	+0.5
3,910,459	+		OLJFJH_18650	0.48	+0.5
3,910,460	-		OLJFJH_18650	0.48	+0.2
3,910,569	+		OLJFJH_18650	0.87	-0.3
3,910,577	+		OLJFJH_18650	0.89	-0.7
3,910,577	+		OLJFJH_18650	0.89	-0.0
3,910,621	+				+2.3
3,910,645	+				-0.9
3,910,646	-				-0.8
3,910,699	+				+0.3
3,910,699	+				+0.3
3,910,699	+				-0.0
3,910,699	+				+0.3
3,910,699	+				+1.5
3,910,700	-				-0.4
3,910,701	+				+0.0
3,910,702	-				+0.1
3,910,702	-				+0.4
3,910,762	-				-0.2
3,910,850	+				+0.3
3,910,850	+				-0.3
3,910,851	-				-0.5
3,910,891	+				-0.1
3,910,891	+				-1.0
3,910,891	+				-0.4
3,910,891	+				-1.8
3,910,892	-				-0.1
3,910,892	-				-0.3
3,910,977	+				+0.7
3,910,978	-				-0.4
3,910,978	-				+0.4
3,910,978	-				+0.4
3,911,010	+				-0.3
3,911,010	+				+0.7
3,911,055	-				-0.7
3,911,262	+		OLJFJH_18655	0.26	-1.8