Strain Fitness in Erwinia amylovora T8 around OLJFJH_16200

Experiment: Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-1
3,420,391	-		OLJFJH_16195	0.45	-3.4
3,420,391	-		OLJFJH_16195	0.45	-0.1
3,420,416	-		OLJFJH_16195	0.47	-1.6
3,420,493	-		OLJFJH_16195	0.51	-0.7
3,420,562	+		OLJFJH_16195	0.55	-2.6
3,420,563	-		OLJFJH_16195	0.55	-2.9
3,420,782	-		OLJFJH_16195	0.67	-2.4
3,421,108	+		OLJFJH_16195	0.86	-0.7
3,421,108	+		OLJFJH_16195	0.86	-1.4
3,421,108	+		OLJFJH_16195	0.86	-2.4
3,421,199	+				-2.3
3,421,388	+				+0.3
3,421,389	-				-2.3
3,421,521	-				-2.4
3,421,532	+		OLJFJH_16200	0.10	-4.0
3,421,532	+		OLJFJH_16200	0.10	-1.8
3,421,532	+		OLJFJH_16200	0.10	-4.3
3,421,532	+		OLJFJH_16200	0.10	-0.4
3,421,532	+		OLJFJH_16200	0.10	-4.0
3,421,533	-		OLJFJH_16200	0.10	-3.1
3,421,533	-		OLJFJH_16200	0.10	-2.2
3,421,533	-		OLJFJH_16200	0.10	-1.9
3,421,534	+		OLJFJH_16200	0.10	-1.3
3,421,534	+		OLJFJH_16200	0.10	-2.4
3,421,534	+		OLJFJH_16200	0.10	-4.2
3,421,534	+		OLJFJH_16200	0.10	-1.6
3,421,534	+		OLJFJH_16200	0.10	-2.5
3,421,535	-		OLJFJH_16200	0.10	-2.2
3,421,535	-		OLJFJH_16200	0.10	-0.7
3,421,758	-		OLJFJH_16200	0.23	-0.4
3,421,901	+		OLJFJH_16200	0.31	-1.9
3,421,995	+		OLJFJH_16200	0.37	-2.2
3,421,995	+		OLJFJH_16200	0.37	-1.9
3,421,996	-		OLJFJH_16200	0.37	-3.1
3,421,996	-		OLJFJH_16200	0.37	-2.7
3,421,996	-		OLJFJH_16200	0.37	-2.4
3,422,192	+		OLJFJH_16200	0.48	-2.6
3,422,192	+		OLJFJH_16200	0.48	-3.4
3,422,192	+		OLJFJH_16200	0.48	-3.4
3,422,193	-		OLJFJH_16200	0.48	-5.5
3,422,193	-		OLJFJH_16200	0.48	-2.6
3,422,195	-		OLJFJH_16200	0.48	-1.7
3,422,330	-		OLJFJH_16200	0.56	-0.7
3,422,330	-		OLJFJH_16200	0.56	-1.1
3,422,550	+		OLJFJH_16200	0.69	-2.8
3,422,551	-		OLJFJH_16200	0.69	-0.1
3,422,551	-		OLJFJH_16200	0.69	-1.3
3,422,911	-		OLJFJH_16200	0.90	-2.6
3,423,084	+				+0.2
3,423,086	+				-1.9
3,423,087	-				-0.5
3,423,243	-		OLJFJH_16205	0.18	-1.0
3,423,511	+		OLJFJH_16205	0.57	+0.1
3,423,511	+		OLJFJH_16205	0.57	-0.1
3,423,512	-		OLJFJH_16205	0.57	+0.3
3,423,512	-		OLJFJH_16205	0.57	-0.6
3,423,551	+		OLJFJH_16205	0.62	-0.1
3,423,552	-		OLJFJH_16205	0.62	-1.1
3,423,746	+				-0.5
3,423,746	+				-1.3
3,423,747	-				-0.2
3,423,856	+				-0.1
3,423,858	+				-0.5
3,423,859	-				-0.8
3,423,859	-				-1.2
3,423,859	-				-0.1
3,423,897	-				-1.9
3,423,957	-				+0.9
3,424,019	+				-0.1
3,424,023	+				+0.1
3,424,024	-				-0.1
3,424,041	-				-2.4
3,424,041	-				-1.3