Strain Fitness in Erwinia amylovora T8 around OLJFJH_16045

Experiment: Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-1
3,379,189	+		OLJFJH_16040	0.31	-0.7
3,379,305	-		OLJFJH_16040	0.42	-1.4
3,379,309	+		OLJFJH_16040	0.42	-0.1
3,379,439	+		OLJFJH_16040	0.54	-2.1
3,379,439	+		OLJFJH_16040	0.54	-0.9
3,379,439	+		OLJFJH_16040	0.54	-0.7
3,379,439	+		OLJFJH_16040	0.54	-0.4
3,379,439	+		OLJFJH_16040	0.54	-1.6
3,379,440	-		OLJFJH_16040	0.54	-1.3
3,379,440	-		OLJFJH_16040	0.54	-0.3
3,379,440	-		OLJFJH_16040	0.54	+0.7
3,379,440	-		OLJFJH_16040	0.54	-0.4
3,379,440	-		OLJFJH_16040	0.54	-0.4
3,379,440	-		OLJFJH_16040	0.54	-0.9
3,379,440	-		OLJFJH_16040	0.54	-0.9
3,379,442	-		OLJFJH_16040	0.54	+0.9
3,379,444	+		OLJFJH_16040	0.55	-1.2
3,379,445	-		OLJFJH_16040	0.55	-2.6
3,379,464	+		OLJFJH_16040	0.56	-1.4
3,379,561	+		OLJFJH_16040	0.65	-0.7
3,379,566	-		OLJFJH_16040	0.66	+0.6
3,379,584	-		OLJFJH_16040	0.67	-1.0
3,379,647	+		OLJFJH_16040	0.73	-0.3
3,379,647	+		OLJFJH_16040	0.73	-0.9
3,379,737	-		OLJFJH_16040	0.81	-0.9
3,379,787	+		OLJFJH_16040	0.86	-1.3
3,379,788	-		OLJFJH_16040	0.86	+0.3
3,379,788	-		OLJFJH_16040	0.86	-1.1
3,379,789	+		OLJFJH_16040	0.86	-1.1
3,379,789	+		OLJFJH_16040	0.86	-0.7
3,379,790	-		OLJFJH_16040	0.86	-0.1
3,379,793	+		OLJFJH_16040	0.86	-2.3
3,379,793	+		OLJFJH_16040	0.86	-3.0
3,379,811	+		OLJFJH_16040	0.88	-1.8
3,379,811	+		OLJFJH_16040	0.88	-2.9
3,379,811	+		OLJFJH_16040	0.88	-2.2
3,379,811	+		OLJFJH_16040	0.88	-1.5
3,379,812	-		OLJFJH_16040	0.88	+0.7
3,379,812	-		OLJFJH_16040	0.88	+0.5
3,379,812	-		OLJFJH_16040	0.88	-1.6
3,379,814	+		OLJFJH_16040	0.88	-1.2
3,379,815	-		OLJFJH_16040	0.88	-1.1
3,379,815	-		OLJFJH_16040	0.88	-0.4
3,379,817	+		OLJFJH_16040	0.88	-1.3
3,379,818	-		OLJFJH_16040	0.88	-0.3
3,379,831	+		OLJFJH_16040	0.90	-1.2
3,379,841	+				-0.8
3,379,842	-				-2.7
3,379,842	-				-0.1
3,379,842	-				+0.8
3,379,932	+				-0.8
3,379,935	-				-0.9
3,379,943	+				-0.7
3,379,943	+				+0.4
3,379,943	+				-0.5
3,379,944	-				+2.1
3,379,944	-				-0.7
3,379,944	-				+0.9
3,379,947	+				-0.2
3,379,948	-				-0.4
3,379,948	-				-0.6
3,380,056	-				-0.7
3,380,121	+				-1.2
3,380,153	-				-2.6
3,380,176	+				-3.8
3,380,176	+				-3.1
3,380,189	-				-2.2
3,380,213	-				-1.8
3,380,282	+				-2.4
3,380,285	-				-2.3
3,380,408	-		OLJFJH_16045	0.19	-2.2
3,380,408	-		OLJFJH_16045	0.19	-0.9
3,380,621	+		OLJFJH_16045	0.37	-3.8
3,380,622	-		OLJFJH_16045	0.37	-3.7
3,380,622	-		OLJFJH_16045	0.37	-3.5
3,380,624	+		OLJFJH_16045	0.38	-2.4
3,380,625	-		OLJFJH_16045	0.38	-0.7
3,380,625	-		OLJFJH_16045	0.38	-1.7
3,380,674	+		OLJFJH_16045	0.42	-1.4
3,380,674	+		OLJFJH_16045	0.42	-3.1
3,380,695	+		OLJFJH_16045	0.43	-3.1
3,380,696	-		OLJFJH_16045	0.44	-3.9
3,380,907	-		OLJFJH_16045	0.61	-3.0
3,380,927	+		OLJFJH_16045	0.63	-3.0
3,380,927	+		OLJFJH_16045	0.63	-2.3
3,380,928	-		OLJFJH_16045	0.63	-1.1
3,381,023	+		OLJFJH_16045	0.71	-2.1
3,381,024	-		OLJFJH_16045	0.71	-3.2
3,381,024	-		OLJFJH_16045	0.71	-2.6
3,381,128	-		OLJFJH_16045	0.80	-2.4
3,381,130	-		OLJFJH_16045	0.80	-3.5
3,381,137	-		OLJFJH_16045	0.81	-2.7
3,381,279	-				-2.2
3,381,325	+				-2.9
3,381,326	-				-1.6
3,381,326	-				-3.1
3,381,326	-				-3.5
3,381,328	+				-3.0
3,381,328	+				-1.7
3,381,329	-				-2.5
3,381,331	-				-1.8
3,381,331	-				-2.8
3,381,331	-				-1.3
3,381,331	-				-3.3
3,381,365	+				-0.3
3,381,366	-				+0.0
3,381,416	+				-1.9
3,381,436	+				-0.9
3,381,487	+				-0.3
3,381,558	-		OLJFJH_16050	0.15	-0.8
3,381,558	-		OLJFJH_16050	0.15	-0.2
3,381,558	-		OLJFJH_16050	0.15	+0.3
3,381,667	+		OLJFJH_16050	0.32	-0.9
3,381,685	+		OLJFJH_16050	0.35	-0.4
3,381,743	+		OLJFJH_16050	0.44	-0.5
3,381,743	+		OLJFJH_16050	0.44	+0.1
3,381,744	-		OLJFJH_16050	0.44	+0.4
3,381,744	-		OLJFJH_16050	0.44	+0.2
3,381,744	-		OLJFJH_16050	0.44	-1.0
3,381,744	-		OLJFJH_16050	0.44	-0.1
3,381,879	+		OLJFJH_16050	0.66	-0.5
3,381,880	-		OLJFJH_16050	0.66	-0.9
3,382,086	+				-1.0
3,382,087	-				+0.1
3,382,093	+				+0.1
3,382,094	-				+0.3
3,382,096	+				+0.3
3,382,096	+				-1.2
3,382,097	-				-1.1
3,382,097	-				-0.3
3,382,138	+				-1.0
3,382,198	-		OLJFJH_16055	0.11	-2.8