Strain Fitness in Erwinia amylovora T8 around OLJFJH_18430

Experiment: Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-8

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOLJFJH_18425 and OLJFJH_18430 are separated by 116 nucleotidesOLJFJH_18430 and OLJFJH_18435 are separated by 262 nucleotides OLJFJH_18425: OLJFJH_18425 - esterase FrsA, at 3,864,638 to 3,865,885 _18425 OLJFJH_18430: OLJFJH_18430 - xanthine phosphoribosyltransferase, at 3,866,002 to 3,866,460 _18430 OLJFJH_18435: OLJFJH_18435 - cytosol nonspecific dipeptidase, at 3,866,723 to 3,868,180 _18435 Position (kb) 3866 3867Strain fitness (log2 ratio) -2 -1 0 1 2at 3865.198 kb on + strand, within OLJFJH_18425at 3865.198 kb on + strand, within OLJFJH_18425at 3865.199 kb on - strand, within OLJFJH_18425at 3865.199 kb on - strand, within OLJFJH_18425at 3865.199 kb on - strand, within OLJFJH_18425at 3865.202 kb on + strand, within OLJFJH_18425at 3865.203 kb on - strand, within OLJFJH_18425at 3865.203 kb on - strand, within OLJFJH_18425at 3865.203 kb on - strand, within OLJFJH_18425at 3865.236 kb on + strand, within OLJFJH_18425at 3865.237 kb on - strand, within OLJFJH_18425at 3865.330 kb on + strand, within OLJFJH_18425at 3865.331 kb on - strand, within OLJFJH_18425at 3865.385 kb on + strand, within OLJFJH_18425at 3865.386 kb on - strand, within OLJFJH_18425at 3865.492 kb on + strand, within OLJFJH_18425at 3865.496 kb on + strand, within OLJFJH_18425at 3865.496 kb on + strand, within OLJFJH_18425at 3865.593 kb on + strand, within OLJFJH_18425at 3865.619 kb on + strand, within OLJFJH_18425at 3865.619 kb on + strand, within OLJFJH_18425at 3865.619 kb on + strand, within OLJFJH_18425at 3865.620 kb on - strand, within OLJFJH_18425at 3865.620 kb on - strand, within OLJFJH_18425at 3865.690 kb on + strand, within OLJFJH_18425at 3865.886 kb on - strandat 3865.886 kb on - strandat 3865.926 kb on - strandat 3866.077 kb on - strand, within OLJFJH_18430at 3866.150 kb on + strand, within OLJFJH_18430at 3866.208 kb on + strand, within OLJFJH_18430at 3866.209 kb on - strand, within OLJFJH_18430at 3866.209 kb on - strand, within OLJFJH_18430at 3866.262 kb on + strand, within OLJFJH_18430at 3866.495 kb on + strandat 3866.524 kb on + strandat 3866.526 kb on + strandat 3866.801 kb on + strandat 3866.827 kb on + strandat 3866.828 kb on - strandat 3866.831 kb on - strandat 3866.995 kb on + strand, within OLJFJH_18435at 3866.996 kb on - strand, within OLJFJH_18435at 3867.109 kb on + strand, within OLJFJH_18435at 3867.110 kb on - strand, within OLJFJH_18435at 3867.187 kb on - strand, within OLJFJH_18435at 3867.211 kb on + strand, within OLJFJH_18435at 3867.211 kb on + strand, within OLJFJH_18435at 3867.251 kb on + strand, within OLJFJH_18435at 3867.251 kb on + strand, within OLJFJH_18435at 3867.251 kb on + strand, within OLJFJH_18435at 3867.251 kb on + strand, within OLJFJH_18435at 3867.251 kb on + strand, within OLJFJH_18435at 3867.251 kb on + strand, within OLJFJH_18435at 3867.251 kb on + strand, within OLJFJH_18435at 3867.251 kb on + strand, within OLJFJH_18435at 3867.251 kb on + strand, within OLJFJH_18435at 3867.251 kb on + strand, within OLJFJH_18435at 3867.251 kb on + strand, within OLJFJH_18435at 3867.252 kb on - strand, within OLJFJH_18435at 3867.252 kb on - strand, within OLJFJH_18435at 3867.252 kb on - strand, within OLJFJH_18435at 3867.252 kb on - strand, within OLJFJH_18435at 3867.252 kb on - strand, within OLJFJH_18435at 3867.252 kb on - strand, within OLJFJH_18435at 3867.252 kb on - strand, within OLJFJH_18435at 3867.252 kb on - strand, within OLJFJH_18435at 3867.302 kb on + strand, within OLJFJH_18435at 3867.302 kb on + strand, within OLJFJH_18435at 3867.302 kb on + strand, within OLJFJH_18435at 3867.302 kb on + strand, within OLJFJH_18435at 3867.302 kb on + strand, within OLJFJH_18435at 3867.303 kb on - strand, within OLJFJH_18435at 3867.303 kb on - strand, within OLJFJH_18435

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Per-strain Table

Position Strand Gene LocusTag Fraction Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-8
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3,865,198 + OLJFJH_18425 0.45 -0.1
3,865,198 + OLJFJH_18425 0.45 -0.3
3,865,199 - OLJFJH_18425 0.45 -0.6
3,865,199 - OLJFJH_18425 0.45 -0.0
3,865,199 - OLJFJH_18425 0.45 -0.6
3,865,202 + OLJFJH_18425 0.45 +0.2
3,865,203 - OLJFJH_18425 0.45 +0.4
3,865,203 - OLJFJH_18425 0.45 +0.2
3,865,203 - OLJFJH_18425 0.45 -1.6
3,865,236 + OLJFJH_18425 0.48 -0.3
3,865,237 - OLJFJH_18425 0.48 +0.1
3,865,330 + OLJFJH_18425 0.55 +2.1
3,865,331 - OLJFJH_18425 0.56 -0.6
3,865,385 + OLJFJH_18425 0.60 -1.0
3,865,386 - OLJFJH_18425 0.60 +0.1
3,865,492 + OLJFJH_18425 0.68 -1.8
3,865,496 + OLJFJH_18425 0.69 +0.1
3,865,496 + OLJFJH_18425 0.69 +0.2
3,865,593 + OLJFJH_18425 0.77 -0.5
3,865,619 + OLJFJH_18425 0.79 -0.6
3,865,619 + OLJFJH_18425 0.79 +0.1
3,865,619 + OLJFJH_18425 0.79 +1.9
3,865,620 - OLJFJH_18425 0.79 -0.9
3,865,620 - OLJFJH_18425 0.79 -0.8
3,865,690 + OLJFJH_18425 0.84 +0.3
3,865,886 - +0.4
3,865,886 - +0.6
3,865,926 - -0.7
3,866,077 - OLJFJH_18430 0.16 +1.3
3,866,150 + OLJFJH_18430 0.32 +1.1
3,866,208 + OLJFJH_18430 0.45 +1.3
3,866,209 - OLJFJH_18430 0.45 +1.2
3,866,209 - OLJFJH_18430 0.45 +1.0
3,866,262 + OLJFJH_18430 0.57 +0.4
3,866,495 + +1.0
3,866,524 + +1.2
3,866,526 + -0.5
3,866,801 + -1.4
3,866,827 + +0.1
3,866,828 - +0.1
3,866,831 - +0.1
3,866,995 + OLJFJH_18435 0.19 -0.6
3,866,996 - OLJFJH_18435 0.19 -1.9
3,867,109 + OLJFJH_18435 0.26 -0.2
3,867,110 - OLJFJH_18435 0.27 -0.1
3,867,187 - OLJFJH_18435 0.32 -0.8
3,867,211 + OLJFJH_18435 0.33 +0.5
3,867,211 + OLJFJH_18435 0.33 +1.3
3,867,251 + OLJFJH_18435 0.36 -0.5
3,867,251 + OLJFJH_18435 0.36 -0.6
3,867,251 + OLJFJH_18435 0.36 -1.2
3,867,251 + OLJFJH_18435 0.36 -0.5
3,867,251 + OLJFJH_18435 0.36 -0.6
3,867,251 + OLJFJH_18435 0.36 +0.2
3,867,251 + OLJFJH_18435 0.36 -0.2
3,867,251 + OLJFJH_18435 0.36 -1.8
3,867,251 + OLJFJH_18435 0.36 +1.2
3,867,251 + OLJFJH_18435 0.36 -0.7
3,867,251 + OLJFJH_18435 0.36 -0.2
3,867,252 - OLJFJH_18435 0.36 -0.3
3,867,252 - OLJFJH_18435 0.36 -2.0
3,867,252 - OLJFJH_18435 0.36 -1.0
3,867,252 - OLJFJH_18435 0.36 -0.6
3,867,252 - OLJFJH_18435 0.36 -0.6
3,867,252 - OLJFJH_18435 0.36 -0.9
3,867,252 - OLJFJH_18435 0.36 -1.2
3,867,252 - OLJFJH_18435 0.36 -0.6
3,867,302 + OLJFJH_18435 0.40 -0.8
3,867,302 + OLJFJH_18435 0.40 -0.6
3,867,302 + OLJFJH_18435 0.40 -0.1
3,867,302 + OLJFJH_18435 0.40 -2.3
3,867,302 + OLJFJH_18435 0.40 -1.4
3,867,303 - OLJFJH_18435 0.40 -0.8
3,867,303 - OLJFJH_18435 0.40 -0.5

Or see this region's nucleotide sequence