Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5840

Experiment: nitrate 0.125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 0.125 M
6,657,283	+		Pf6N2E2_5839	0.51	+0.8
6,657,283	+		Pf6N2E2_5839	0.51	+1.3
6,657,284	-		Pf6N2E2_5839	0.51	+0.2
6,657,284	-		Pf6N2E2_5839	0.51	-0.8
6,657,736	+		Pf6N2E2_5839	0.77	+1.1
6,657,737	-		Pf6N2E2_5839	0.77	-0.4
6,657,737	-		Pf6N2E2_5839	0.77	-1.0
6,657,737	-				+1.8
6,657,895	+		Pf6N2E2_5839	0.86	+1.4
6,657,895	+		Pf6N2E2_5839	0.86	-0.5
6,657,896	-		Pf6N2E2_5839	0.86	+0.5
6,658,057	+				-1.5
6,658,211	+		Pf6N2E2_5840	0.28	-0.5
6,658,211	+		Pf6N2E2_5840	0.28	-1.2
6,658,211	+		Pf6N2E2_5840	0.28	+0.3
6,658,301	+		Pf6N2E2_5840	0.78	-2.7
6,658,301	+		Pf6N2E2_5840	0.78	-1.9
6,658,302	-		Pf6N2E2_5840	0.78	-0.2
6,658,435	+				+0.4
6,658,435	+				-1.0
6,658,436	-				-2.1
6,658,729	+		Pf6N2E2_5841	0.84	-0.2
6,658,926	+				+0.6
6,658,926	+				-0.2
6,658,926	+				+2.5
6,658,926	+				-1.0
6,658,926	+				-0.6
6,658,926	+				-0.0
6,658,926	+				+0.4
6,658,927	-				-0.5
6,658,927	-				+0.4
6,658,927	-				+0.5
6,659,050	+		Pf6N2E2_5842	0.23	-1.2
6,659,113	+		Pf6N2E2_5842	0.49	+0.7
6,659,113	+		Pf6N2E2_5842	0.49	+0.2
6,659,114	-		Pf6N2E2_5842	0.49	+0.5
6,659,114	-		Pf6N2E2_5842	0.49	-0.9
6,659,114	-		Pf6N2E2_5842	0.49	-1.3
6,659,114	-		Pf6N2E2_5842	0.49	+1.5
6,659,114	-		Pf6N2E2_5842	0.49	-0.5