Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_15160 and AO356_15165 are separated by 657 nucleotides AO356_15165 and AO356_15170 are separated by 6 nucleotides
AO356_15160: AO356_15160 - hypothetical protein, at 3,435,639 to 3,435,998
_15160
AO356_15165: AO356_15165 - protein cII, at 3,436,656 to 3,437,309
_15165
AO356_15170: AO356_15170 - hypothetical protein, at 3,437,316 to 3,438,443
_15170
Position (kb)
3436
3437
3438 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3435.704 kb on + strand, within AO356_15160 at 3435.704 kb on + strand, within AO356_15160 at 3435.996 kb on + strand at 3435.996 kb on + strand at 3435.996 kb on + strand at 3435.996 kb on + strand at 3435.997 kb on - strand at 3436.022 kb on + strand at 3436.022 kb on + strand at 3436.022 kb on + strand at 3436.057 kb on - strand at 3436.110 kb on + strand at 3436.110 kb on + strand at 3436.110 kb on + strand at 3436.111 kb on - strand at 3436.111 kb on - strand at 3436.111 kb on - strand at 3436.145 kb on + strand at 3436.148 kb on + strand at 3436.148 kb on + strand at 3436.148 kb on + strand at 3436.148 kb on + strand at 3436.148 kb on + strand at 3436.149 kb on - strand at 3436.149 kb on - strand at 3436.149 kb on - strand at 3436.168 kb on + strand at 3436.168 kb on + strand at 3436.168 kb on + strand at 3436.168 kb on + strand at 3436.168 kb on + strand at 3436.168 kb on + strand at 3436.168 kb on + strand at 3436.168 kb on + strand at 3436.168 kb on + strand at 3436.168 kb on + strand at 3436.168 kb on + strand at 3436.168 kb on + strand at 3436.169 kb on - strand at 3436.169 kb on - strand at 3436.169 kb on - strand at 3436.169 kb on - strand at 3436.169 kb on - strand at 3436.169 kb on - strand at 3436.169 kb on - strand at 3436.169 kb on - strand at 3436.169 kb on - strand at 3436.169 kb on - strand at 3436.169 kb on - strand at 3436.169 kb on - strand at 3436.170 kb on + strand at 3436.170 kb on + strand at 3436.170 kb on + strand at 3436.170 kb on + strand at 3436.170 kb on + strand at 3436.170 kb on + strand at 3436.170 kb on + strand at 3436.170 kb on + strand at 3436.170 kb on + strand at 3436.170 kb on + strand at 3436.170 kb on + strand at 3436.170 kb on + strand at 3436.170 kb on + strand at 3436.170 kb on + strand at 3436.170 kb on + strand at 3436.170 kb on + strand at 3436.170 kb on + strand at 3436.171 kb on - strand at 3436.171 kb on - strand at 3436.171 kb on - strand at 3436.171 kb on - strand at 3436.171 kb on - strand at 3436.171 kb on - strand at 3436.171 kb on - strand at 3436.171 kb on - strand at 3436.171 kb on - strand at 3436.171 kb on - strand at 3436.171 kb on - strand at 3436.171 kb on - strand at 3436.222 kb on + strand at 3436.323 kb on + strand at 3436.324 kb on - strand at 3436.324 kb on - strand at 3436.456 kb on + strand at 3436.457 kb on - strand at 3436.513 kb on + strand at 3436.513 kb on + strand at 3436.514 kb on - strand at 3436.517 kb on - strand at 3436.575 kb on + strand at 3436.585 kb on - strand at 3436.594 kb on + strand at 3436.594 kb on + strand at 3436.637 kb on + strand at 3436.638 kb on - strand at 3436.641 kb on + strand at 3436.850 kb on - strand, within AO356_15165 at 3437.030 kb on + strand, within AO356_15165 at 3437.129 kb on - strand, within AO356_15165 at 3437.163 kb on - strand, within AO356_15165 at 3437.231 kb on - strand, within AO356_15165 at 3437.248 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 3,435,704 + AO356_15160 0.18 +1.1 3,435,704 + AO356_15160 0.18 +1.1 3,435,996 + +0.3 3,435,996 + -0.8 3,435,996 + -0.5 3,435,996 + +0.2 3,435,997 - +0.3 3,436,022 + +0.8 3,436,022 + +0.3 3,436,022 + +0.8 3,436,057 - -0.3 3,436,110 + +0.3 3,436,110 + +0.1 3,436,110 + -0.3 3,436,111 - -0.6 3,436,111 - +0.1 3,436,111 - -0.0 3,436,145 + +0.9 3,436,148 + +0.3 3,436,148 + +0.6 3,436,148 + +0.6 3,436,148 + -0.0 3,436,148 + +0.6 3,436,149 - +0.7 3,436,149 - -0.4 3,436,149 - +0.8 3,436,168 + -0.1 3,436,168 + +0.1 3,436,168 + +1.2 3,436,168 + +0.0 3,436,168 + -0.0 3,436,168 + -0.0 3,436,168 + -0.0 3,436,168 + +0.6 3,436,168 + -1.1 3,436,168 + +1.7 3,436,168 + +1.4 3,436,168 + +0.9 3,436,169 - +0.4 3,436,169 - +0.3 3,436,169 - -0.2 3,436,169 - +0.4 3,436,169 - +0.7 3,436,169 - +0.4 3,436,169 - +0.2 3,436,169 - +0.2 3,436,169 - +0.6 3,436,169 - +0.1 3,436,169 - -2.1 3,436,169 - +0.5 3,436,170 + +0.9 3,436,170 + +0.1 3,436,170 + -0.0 3,436,170 + -0.2 3,436,170 + -0.4 3,436,170 + -0.8 3,436,170 + -0.2 3,436,170 + +1.1 3,436,170 + -0.6 3,436,170 + -0.8 3,436,170 + -0.9 3,436,170 + +1.0 3,436,170 + -0.3 3,436,170 + +2.6 3,436,170 + -0.5 3,436,170 + +0.4 3,436,170 + -0.8 3,436,171 - +0.7 3,436,171 - -1.1 3,436,171 - +0.1 3,436,171 - +1.3 3,436,171 - +0.8 3,436,171 - +1.1 3,436,171 - +1.0 3,436,171 - -0.1 3,436,171 - +0.4 3,436,171 - +1.0 3,436,171 - -1.0 3,436,171 - +0.3 3,436,222 + +0.8 3,436,323 + +0.3 3,436,324 - +0.1 3,436,324 - +0.5 3,436,456 + -0.3 3,436,457 - -1.6 3,436,513 + +1.1 3,436,513 + +3.2 3,436,514 - -2.3 3,436,517 - +1.0 3,436,575 + -0.3 3,436,585 - -1.0 3,436,594 + +1.2 3,436,594 + +1.3 3,436,637 + -1.1 3,436,638 - -1.0 3,436,641 + -0.3 3,436,850 - AO356_15165 0.30 -2.3 3,437,030 + AO356_15165 0.57 -1.2 3,437,129 - AO356_15165 0.72 -1.6 3,437,163 - AO356_15165 0.78 -1.5 3,437,231 - AO356_15165 0.88 -2.1 3,437,248 + -0.3
Or see this region's nucleotide sequence