Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_08475 and AO356_08480 are separated by 848 nucleotides AO356_08480 and AO356_08485 overlap by 4 nucleotides AO356_08485 and AO356_08490 overlap by 4 nucleotides
AO356_08475: AO356_08475 - hypothetical protein, at 1,905,335 to 1,906,099
_08475
AO356_08480: AO356_08480 - ABC transporter ATP-binding protein, at 1,906,948 to 1,907,664
_08480
AO356_08485: AO356_08485 - ABC transporter ATP-binding protein, at 1,907,661 to 1,908,533
_08485
AO356_08490: AO356_08490 - branched-chain amino acid ABC transporter permease, at 1,908,530 to 1,909,810
_08490
Position (kb)
1906
1907
1908 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1906.081 kb on + strand at 1906.081 kb on + strand at 1906.216 kb on - strand at 1906.276 kb on + strand at 1906.298 kb on - strand at 1906.415 kb on - strand at 1906.484 kb on + strand at 1906.542 kb on + strand at 1906.542 kb on + strand at 1906.543 kb on - strand at 1906.543 kb on - strand at 1906.543 kb on - strand at 1906.543 kb on - strand at 1906.622 kb on + strand at 1906.622 kb on + strand at 1906.623 kb on - strand at 1906.623 kb on - strand at 1906.624 kb on + strand at 1906.624 kb on + strand at 1906.642 kb on - strand at 1906.724 kb on - strand at 1906.724 kb on - strand at 1906.724 kb on - strand at 1906.724 kb on - strand at 1906.724 kb on - strand at 1906.724 kb on - strand at 1906.899 kb on + strand at 1906.935 kb on + strand at 1906.935 kb on + strand at 1906.935 kb on + strand at 1906.935 kb on + strand at 1906.965 kb on - strand at 1907.042 kb on + strand, within AO356_08480 at 1907.042 kb on + strand, within AO356_08480 at 1907.042 kb on + strand, within AO356_08480 at 1907.042 kb on + strand, within AO356_08480 at 1907.042 kb on + strand, within AO356_08480 at 1907.043 kb on - strand, within AO356_08480 at 1907.043 kb on - strand, within AO356_08480 at 1907.043 kb on - strand, within AO356_08480 at 1907.043 kb on - strand, within AO356_08480 at 1907.043 kb on - strand, within AO356_08480 at 1907.043 kb on - strand, within AO356_08480 at 1907.043 kb on - strand, within AO356_08480 at 1907.043 kb on - strand, within AO356_08480 at 1907.043 kb on - strand, within AO356_08480 at 1907.043 kb on - strand, within AO356_08480 at 1907.043 kb on - strand, within AO356_08480 at 1907.043 kb on - strand, within AO356_08480 at 1907.330 kb on + strand, within AO356_08480 at 1907.330 kb on + strand, within AO356_08480 at 1907.438 kb on + strand, within AO356_08480 at 1907.438 kb on + strand, within AO356_08480 at 1907.438 kb on + strand, within AO356_08480 at 1907.438 kb on + strand, within AO356_08480 at 1907.438 kb on + strand, within AO356_08480 at 1907.438 kb on + strand, within AO356_08480 at 1907.438 kb on + strand, within AO356_08480 at 1907.438 kb on + strand, within AO356_08480 at 1907.438 kb on + strand, within AO356_08480 at 1907.439 kb on - strand, within AO356_08480 at 1907.439 kb on - strand, within AO356_08480 at 1907.439 kb on - strand, within AO356_08480 at 1907.439 kb on - strand, within AO356_08480 at 1907.439 kb on - strand, within AO356_08480 at 1907.439 kb on - strand, within AO356_08480 at 1907.474 kb on + strand, within AO356_08480 at 1907.474 kb on + strand, within AO356_08480 at 1907.475 kb on - strand, within AO356_08480 at 1907.475 kb on - strand, within AO356_08480 at 1907.475 kb on - strand, within AO356_08480 at 1907.475 kb on - strand, within AO356_08480 at 1907.475 kb on - strand, within AO356_08480 at 1907.621 kb on + strand at 1907.621 kb on + strand at 1907.622 kb on - strand at 1907.652 kb on + strand at 1907.652 kb on + strand at 1907.653 kb on - strand at 1907.653 kb on - strand at 1907.664 kb on + strand at 1907.664 kb on + strand at 1907.664 kb on + strand at 1907.664 kb on + strand at 1907.664 kb on + strand at 1907.664 kb on + strand at 1907.664 kb on + strand at 1907.665 kb on - strand at 1907.665 kb on - strand at 1907.665 kb on - strand at 1907.665 kb on - strand at 1907.692 kb on + strand at 1907.692 kb on + strand at 1907.793 kb on + strand, within AO356_08485 at 1907.793 kb on + strand, within AO356_08485 at 1907.793 kb on + strand, within AO356_08485 at 1907.793 kb on + strand, within AO356_08485 at 1907.793 kb on + strand, within AO356_08485 at 1907.978 kb on - strand, within AO356_08485 at 1908.037 kb on + strand, within AO356_08485 at 1908.038 kb on - strand, within AO356_08485 at 1908.191 kb on + strand, within AO356_08485 at 1908.192 kb on - strand, within AO356_08485 at 1908.241 kb on + strand, within AO356_08485 at 1908.241 kb on + strand, within AO356_08485 at 1908.241 kb on + strand, within AO356_08485 at 1908.242 kb on - strand, within AO356_08485 at 1908.242 kb on - strand, within AO356_08485 at 1908.242 kb on - strand, within AO356_08485 at 1908.242 kb on - strand, within AO356_08485 at 1908.244 kb on + strand, within AO356_08485 at 1908.244 kb on + strand, within AO356_08485 at 1908.244 kb on + strand, within AO356_08485 at 1908.245 kb on - strand, within AO356_08485 at 1908.245 kb on - strand, within AO356_08485 at 1908.245 kb on - strand, within AO356_08485 at 1908.370 kb on + strand, within AO356_08485 at 1908.370 kb on + strand, within AO356_08485 at 1908.370 kb on + strand, within AO356_08485 at 1908.371 kb on - strand, within AO356_08485 at 1908.371 kb on - strand, within AO356_08485 at 1908.520 kb on - strand at 1908.574 kb on + strand at 1908.643 kb on - strand at 1908.643 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 1,906,081 + +0.6 1,906,081 + +0.2 1,906,216 - +0.3 1,906,276 + +0.0 1,906,298 - -0.2 1,906,415 - +0.8 1,906,484 + +0.2 1,906,542 + +0.4 1,906,542 + -0.4 1,906,543 - -0.0 1,906,543 - +0.0 1,906,543 - +0.2 1,906,543 - +0.0 1,906,622 + -0.2 1,906,622 + +0.3 1,906,623 - -0.6 1,906,623 - -0.5 1,906,624 + -0.0 1,906,624 + +0.3 1,906,642 - -0.7 1,906,724 - +0.7 1,906,724 - +0.1 1,906,724 - +0.2 1,906,724 - -0.7 1,906,724 - +0.3 1,906,724 - +0.1 1,906,899 + +0.2 1,906,935 + +0.4 1,906,935 + -1.4 1,906,935 + +0.5 1,906,935 + -0.2 1,906,965 - -3.3 1,907,042 + AO356_08480 0.13 -1.7 1,907,042 + AO356_08480 0.13 -1.5 1,907,042 + AO356_08480 0.13 -1.2 1,907,042 + AO356_08480 0.13 -1.5 1,907,042 + AO356_08480 0.13 -0.3 1,907,043 - AO356_08480 0.13 -1.3 1,907,043 - AO356_08480 0.13 -1.6 1,907,043 - AO356_08480 0.13 -2.8 1,907,043 - AO356_08480 0.13 -0.9 1,907,043 - AO356_08480 0.13 -0.8 1,907,043 - AO356_08480 0.13 -0.4 1,907,043 - AO356_08480 0.13 -1.2 1,907,043 - AO356_08480 0.13 -0.9 1,907,043 - AO356_08480 0.13 -1.2 1,907,043 - AO356_08480 0.13 -0.1 1,907,043 - AO356_08480 0.13 -2.1 1,907,043 - AO356_08480 0.13 -0.7 1,907,330 + AO356_08480 0.53 -1.5 1,907,330 + AO356_08480 0.53 -0.5 1,907,438 + AO356_08480 0.68 +0.0 1,907,438 + AO356_08480 0.68 -1.4 1,907,438 + AO356_08480 0.68 -0.3 1,907,438 + AO356_08480 0.68 -1.6 1,907,438 + AO356_08480 0.68 -0.6 1,907,438 + AO356_08480 0.68 -2.0 1,907,438 + AO356_08480 0.68 -0.1 1,907,438 + AO356_08480 0.68 -1.6 1,907,438 + AO356_08480 0.68 -1.0 1,907,439 - AO356_08480 0.68 -0.6 1,907,439 - AO356_08480 0.68 -1.9 1,907,439 - AO356_08480 0.68 -1.6 1,907,439 - AO356_08480 0.68 -0.8 1,907,439 - AO356_08480 0.68 -1.4 1,907,439 - AO356_08480 0.68 -1.1 1,907,474 + AO356_08480 0.73 -0.4 1,907,474 + AO356_08480 0.73 -1.2 1,907,475 - AO356_08480 0.74 -0.9 1,907,475 - AO356_08480 0.74 -2.2 1,907,475 - AO356_08480 0.74 -1.4 1,907,475 - AO356_08480 0.74 -0.3 1,907,475 - AO356_08480 0.74 +0.3 1,907,621 + -0.1 1,907,621 + -1.2 1,907,622 - -1.2 1,907,652 + +0.1 1,907,652 + -1.9 1,907,653 - -1.6 1,907,653 - -1.1 1,907,664 + -1.1 1,907,664 + -2.2 1,907,664 + -0.2 1,907,664 + -1.5 1,907,664 + -0.4 1,907,664 + -1.2 1,907,664 + -1.2 1,907,665 - -1.5 1,907,665 - -0.3 1,907,665 - -0.4 1,907,665 - +0.3 1,907,692 + -2.3 1,907,692 + -1.5 1,907,793 + AO356_08485 0.15 -0.4 1,907,793 + AO356_08485 0.15 -1.4 1,907,793 + AO356_08485 0.15 +0.2 1,907,793 + AO356_08485 0.15 -2.1 1,907,793 + AO356_08485 0.15 -0.7 1,907,978 - AO356_08485 0.36 -1.5 1,908,037 + AO356_08485 0.43 -1.1 1,908,038 - AO356_08485 0.43 -1.2 1,908,191 + AO356_08485 0.61 -1.9 1,908,192 - AO356_08485 0.61 -0.5 1,908,241 + AO356_08485 0.66 -1.4 1,908,241 + AO356_08485 0.66 -0.1 1,908,241 + AO356_08485 0.66 -1.0 1,908,242 - AO356_08485 0.67 -0.8 1,908,242 - AO356_08485 0.67 -0.1 1,908,242 - AO356_08485 0.67 -1.2 1,908,242 - AO356_08485 0.67 -3.1 1,908,244 + AO356_08485 0.67 -1.4 1,908,244 + AO356_08485 0.67 -1.0 1,908,244 + AO356_08485 0.67 -1.1 1,908,245 - AO356_08485 0.67 +0.0 1,908,245 - AO356_08485 0.67 -1.0 1,908,245 - AO356_08485 0.67 -1.2 1,908,370 + AO356_08485 0.81 -1.0 1,908,370 + AO356_08485 0.81 -0.7 1,908,370 + AO356_08485 0.81 -1.7 1,908,371 - AO356_08485 0.81 -2.0 1,908,371 - AO356_08485 0.81 -0.6 1,908,520 - -1.6 1,908,574 + -1.8 1,908,643 - -0.3 1,908,643 - -0.5
Or see this region's nucleotide sequence