Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1862

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
1,973,841	+		Ga0059261_1861	0.70	+0.4
1,973,841	+		Ga0059261_1861	0.70	+3.1
1,973,841	+		Ga0059261_1861	0.70	-0.4
1,973,841	+		Ga0059261_1861	0.70	-0.5
1,973,841	+		Ga0059261_1861	0.70	+0.4
1,973,841	+		Ga0059261_1861	0.70	-0.3
1,973,841	+		Ga0059261_1861	0.70	-2.2
1,973,842	-		Ga0059261_1861	0.70	+0.9
1,973,842	-		Ga0059261_1861	0.70	+2.3
1,973,887	+		Ga0059261_1861	0.73	-0.2
1,973,887	+		Ga0059261_1861	0.73	+1.0
1,973,888	-		Ga0059261_1861	0.73	+0.6
1,973,955	+		Ga0059261_1861	0.77	-0.9
1,973,955	+		Ga0059261_1861	0.77	+0.7
1,973,956	-		Ga0059261_1861	0.77	-1.8
1,973,973	+		Ga0059261_1861	0.78	+0.4
1,973,973	+		Ga0059261_1861	0.78	-0.9
1,973,974	-		Ga0059261_1861	0.78	+0.3
1,973,974	-		Ga0059261_1861	0.78	-0.1
1,973,974	-		Ga0059261_1861	0.78	+0.3
1,973,974	-		Ga0059261_1861	0.78	+0.3
1,973,974	-		Ga0059261_1861	0.78	+0.0
1,973,974	-		Ga0059261_1861	0.78	-2.7
1,973,980	+		Ga0059261_1861	0.79	-2.3
1,973,980	+		Ga0059261_1861	0.79	-1.0
1,973,980	+		Ga0059261_1861	0.79	-2.0
1,973,980	+		Ga0059261_1861	0.79	-1.8
1,973,980	+		Ga0059261_1861	0.79	-0.5
1,973,980	+		Ga0059261_1861	0.79	+2.6
1,973,980	+		Ga0059261_1861	0.79	+1.0
1,973,981	-		Ga0059261_1861	0.79	-1.3
1,973,981	-		Ga0059261_1861	0.79	-0.2
1,973,981	-		Ga0059261_1861	0.79	-1.5
1,973,981	-		Ga0059261_1861	0.79	+1.6
1,973,981	-		Ga0059261_1861	0.79	-1.3
1,973,981	-		Ga0059261_1861	0.79	-0.1
1,974,043	+		Ga0059261_1861	0.82	+0.1
1,974,043	+		Ga0059261_1861	0.82	-0.3
1,974,043	+		Ga0059261_1861	0.82	-3.4
1,974,044	-				+0.4
1,974,113	+		Ga0059261_1861	0.87	-1.5
1,974,113	+		Ga0059261_1861	0.87	+0.3
1,974,113	+		Ga0059261_1861	0.87	+0.1
1,974,171	+				+3.0
1,974,171	+				+0.4
1,974,171	+				+2.9
1,974,171	+				+0.2
1,974,171	+				+1.5
1,974,172	-				-1.0
1,974,172	-				-1.6
1,974,172	-				-0.6
1,974,226	+				-0.6
1,974,226	+				-0.2
1,974,227	-				-1.8
1,974,227	-				-0.9
1,974,227	-				-0.6
1,974,227	-				+0.8
1,974,227	-				-1.3
1,974,258	-				+1.1
1,974,268	-				+0.1
1,974,268	-				-0.3
1,974,268	-				-0.2
1,974,301	+				+0.3
1,974,331	+				+0.1
1,974,331	+				-0.3
1,974,331	+				-1.8
1,974,332	-				-0.3
1,974,332	-				-1.7
1,974,332	-				+0.3
1,974,378	+				+0.1
1,974,379	-				-0.2
1,974,396	+				-2.8
1,974,397	-				-0.6
1,974,397	-				+0.1
1,974,397	-				-0.2
1,974,397	-				-0.5
1,974,508	+				+0.5
1,974,508	+				-0.7
1,974,514	+				-3.7
1,974,534	+				-2.9
1,974,534	+				+1.4
1,974,534	+				-1.2
1,974,534	+				-1.8
1,974,535	-				-0.4
1,974,535	-				+3.5
1,974,535	-				-0.8
1,974,535	-				+0.3
1,974,629	+				+0.2
1,974,629	+				-1.5
1,974,629	+				-0.4
1,974,629	+				+0.3
1,974,630	-				-1.1
1,974,630	-				-1.8
1,974,630	-				-0.8
1,974,655	+				-2.2
1,974,655	+				-2.8
1,974,656	-				+0.0
1,974,656	-				-0.0
1,974,673	+				-0.2
1,974,673	+				+1.6
1,974,673	+				-1.3
1,974,674	-				-2.6
1,974,674	-				+1.4
1,974,674	-				-0.3
1,974,685	+				+1.2
1,974,686	-				+0.6
1,974,698	+				-1.6
1,974,698	+				+1.0
1,974,698	+				-0.6
1,974,698	+				-0.9
1,974,699	-				+4.4
1,974,699	-				+0.1
1,974,722	+				+1.3
1,974,722	+				-2.8
1,974,722	+				-1.3
1,974,722	+				+0.4
1,974,722	+				-0.3
1,974,722	+				+0.1
1,974,722	+				-0.5
1,974,722	+				+2.1
1,974,722	+				-2.2
1,974,722	+				-0.2
1,974,722	+				-1.7
1,974,722	+				+1.4
1,974,722	+				-1.4
1,974,722	+				+1.2
1,974,722	+				+1.9
1,974,722	+				-0.6
1,974,722	+				-0.4
1,974,723	-				+1.6
1,974,723	-				+0.2
1,974,723	-				-2.1
1,974,723	-				-2.1
1,974,723	-				+0.7
1,974,723	-				-1.8
1,974,723	-				-1.0
1,974,723	-				+0.1
1,974,723	-				+1.0
1,974,723	-				-1.3
1,974,723	-				+1.3
1,974,723	-				+2.3
1,974,723	-				-0.9
1,974,723	-				-1.2
1,974,723	-				-0.6
1,974,723	-				-1.7
1,974,723	-				-1.4
1,974,723	-				+0.5
1,974,723	-				-0.8
1,974,723	-				-2.2
1,974,723	-				-0.5
1,974,956	+		Ga0059261_1862	0.83	-0.2
1,974,956	+		Ga0059261_1862	0.83	-0.0
1,974,956	+		Ga0059261_1862	0.83	-0.6
1,974,956	+		Ga0059261_1862	0.83	-4.1
1,974,957	-		Ga0059261_1862	0.84	-1.3
1,974,957	-		Ga0059261_1862	0.84	-0.9
1,975,016	+				+0.3
1,975,016	+				+2.0
1,975,017	-				-0.6
1,975,017	-				-1.4
1,975,027	+				+1.5
1,975,027	+				-0.0
1,975,027	+				-0.5
1,975,049	+				-0.8
1,975,049	+				-0.1
1,975,049	+				+0.3
1,975,049	+				-0.7
1,975,049	+				-0.8
1,975,049	+				-3.0
1,975,049	+				+3.5
1,975,049	+				+1.8
1,975,050	-				-0.3
1,975,050	-				+1.3
1,975,050	-				-0.5
1,975,050	-				-1.4
1,975,050	-				+0.8
1,975,050	-				-1.2
1,975,097	+				-0.6
1,975,097	+				-1.6
1,975,098	-				+2.0
1,975,123	+				-0.7
1,975,133	+				-1.4
1,975,134	-				+0.3
1,975,136	+				-1.8
1,975,136	+				+2.4
1,975,136	+				+0.8
1,975,136	+				+1.4
1,975,136	+				+0.9
1,975,137	-				+2.0
1,975,137	-				+1.7
1,975,137	-				+1.1
1,975,137	-				+0.5
1,975,205	+		Ga0059261_1863	0.43	+0.5
1,975,205	+		Ga0059261_1863	0.43	-0.1
1,975,205	+		Ga0059261_1863	0.43	+0.6
1,975,205	+		Ga0059261_1863	0.43	+0.1
1,975,205	+		Ga0059261_1863	0.43	-1.1
1,975,205	+		Ga0059261_1863	0.43	+0.4
1,975,205	+		Ga0059261_1863	0.43	-1.3
1,975,205	+		Ga0059261_1863	0.43	+2.9
1,975,206	-		Ga0059261_1863	0.43	+1.4
1,975,206	-		Ga0059261_1863	0.43	-2.1
1,975,206	-		Ga0059261_1863	0.43	-0.6
1,975,206	-		Ga0059261_1863	0.43	+1.4
1,975,206	-		Ga0059261_1863	0.43	+2.0
1,975,206	-		Ga0059261_1863	0.43	-1.7
1,975,206	-		Ga0059261_1863	0.43	-0.4
1,975,206	-		Ga0059261_1863	0.43	+2.7
1,975,206	-		Ga0059261_1863	0.43	+0.0
1,975,276	+		Ga0059261_1863	0.84	-0.2
1,975,276	+		Ga0059261_1863	0.84	+1.7
1,975,276	+		Ga0059261_1863	0.84	-1.5
1,975,276	+		Ga0059261_1863	0.84	-0.4
1,975,276	+		Ga0059261_1863	0.84	-0.5
1,975,276	+		Ga0059261_1863	0.84	-0.6
1,975,276	+		Ga0059261_1863	0.84	+0.2
1,975,276	+		Ga0059261_1863	0.84	+0.3
1,975,277	-		Ga0059261_1863	0.85	-0.5
1,975,277	-		Ga0059261_1863	0.85	-1.6
1,975,277	-		Ga0059261_1863	0.85	-1.3
1,975,277	-		Ga0059261_1863	0.85	-0.3
1,975,277	-		Ga0059261_1863	0.85	+1.5
1,975,277	-		Ga0059261_1863	0.85	+1.5
1,975,279	-		Ga0059261_1863	0.86	+2.8
1,975,310	+				-0.5
1,975,310	+				-0.7
1,975,310	+				-1.0
1,975,311	-				-0.7
1,975,316	+				+1.0
1,975,316	+				-1.6
1,975,316	+				-1.9
1,975,316	+				-0.2
1,975,317	-				-0.9
1,975,317	-				+1.7
1,975,317	-				+0.5
1,975,317	-				-1.6
1,975,317	-				+0.6
1,975,476	+				-1.4
1,975,477	-				+0.1
1,975,538	-				+1.1
1,975,538	-				-1.3
1,975,604	+		Ga0059261_1864	0.11	+0.8
1,975,604	+		Ga0059261_1864	0.11	+0.3
1,975,604	+		Ga0059261_1864	0.11	-1.3
1,975,605	-				+0.1
1,975,605	-		Ga0059261_1864	0.11	-1.4
1,975,605	-		Ga0059261_1864	0.11	+0.6
1,975,846	+		Ga0059261_1864	0.22	+0.7
1,975,846	+		Ga0059261_1864	0.22	+3.4
1,975,846	+		Ga0059261_1864	0.22	+1.6
1,975,846	+		Ga0059261_1864	0.22	-0.3
1,975,846	+		Ga0059261_1864	0.22	-0.1
1,975,846	+		Ga0059261_1864	0.22	+2.0
1,975,846	+		Ga0059261_1864	0.22	-0.1
1,975,846	+		Ga0059261_1864	0.22	+0.3
1,975,846	+		Ga0059261_1864	0.22	-1.6
1,975,846	+		Ga0059261_1864	0.22	-1.1
1,975,847	-		Ga0059261_1864	0.22	+1.2
1,975,847	-		Ga0059261_1864	0.22	-1.4
1,975,847	-		Ga0059261_1864	0.22	-2.3
1,975,847	-		Ga0059261_1864	0.22	-0.8
1,975,847	-		Ga0059261_1864	0.22	-0.3
1,975,847	-				+2.1
1,975,847	-		Ga0059261_1864	0.22	+1.1
1,975,847	-		Ga0059261_1864	0.22	-0.2
1,975,942	+		Ga0059261_1864	0.27	-0.7
1,975,942	+		Ga0059261_1864	0.27	-0.6
1,975,942	+		Ga0059261_1864	0.27	-0.6
1,975,942	+		Ga0059261_1864	0.27	-0.1
1,975,942	+		Ga0059261_1864	0.27	+0.3
1,975,942	+		Ga0059261_1864	0.27	-1.4
1,975,942	+		Ga0059261_1864	0.27	+2.4
1,975,942	+		Ga0059261_1864	0.27	+1.6
1,975,942	+		Ga0059261_1864	0.27	-2.2
1,975,942	+		Ga0059261_1864	0.27	+0.8
1,975,942	+		Ga0059261_1864	0.27	-1.3
1,975,942	+				+0.8
1,975,943	-		Ga0059261_1864	0.27	+1.5
1,975,943	-		Ga0059261_1864	0.27	+2.1
1,975,943	-		Ga0059261_1864	0.27	-0.3
1,975,943	-		Ga0059261_1864	0.27	-1.7
1,975,943	-		Ga0059261_1864	0.27	+2.1
1,975,943	-		Ga0059261_1864	0.27	-0.2