Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1566

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
1,636,578	-		Ga0059261_1565	0.51	-1.4
1,636,578	-		Ga0059261_1565	0.51	-1.3
1,636,578	-		Ga0059261_1565	0.51	-1.5
1,636,578	-		Ga0059261_1565	0.51	+0.5
1,636,667	+		Ga0059261_1565	0.55	+0.7
1,636,667	+		Ga0059261_1565	0.55	+0.0
1,636,667	+		Ga0059261_1565	0.55	+0.0
1,636,668	-		Ga0059261_1565	0.55	+1.3
1,636,668	-		Ga0059261_1565	0.55	-2.8
1,636,706	+		Ga0059261_1565	0.57	-1.8
1,636,706	+		Ga0059261_1565	0.57	-1.4
1,636,706	+		Ga0059261_1565	0.57	-0.7
1,636,706	+		Ga0059261_1565	0.57	-2.5
1,636,706	+		Ga0059261_1565	0.57	+0.0
1,636,707	-		Ga0059261_1565	0.57	-3.1
1,636,707	-				+2.3
1,636,707	-		Ga0059261_1565	0.57	-1.8
1,636,758	-		Ga0059261_1565	0.60	-1.0
1,636,943	-		Ga0059261_1565	0.69	-0.8
1,636,957	+		Ga0059261_1565	0.70	-1.0
1,636,957	+		Ga0059261_1565	0.70	-1.1
1,636,958	-		Ga0059261_1565	0.70	-1.7
1,636,958	-		Ga0059261_1565	0.70	-0.3
1,636,958	-		Ga0059261_1565	0.70	-2.6
1,636,958	-		Ga0059261_1565	0.70	-2.1
1,636,958	-		Ga0059261_1565	0.70	-1.8
1,636,958	-		Ga0059261_1565	0.70	-0.9
1,636,961	+		Ga0059261_1565	0.70	-0.8
1,636,961	+		Ga0059261_1565	0.70	-1.5
1,636,961	+		Ga0059261_1565	0.70	-0.3
1,636,961	+		Ga0059261_1565	0.70	-0.3
1,636,961	+		Ga0059261_1565	0.70	+1.3
1,636,961	+		Ga0059261_1565	0.70	+0.0
1,636,962	-		Ga0059261_1565	0.70	+0.0
1,636,962	-		Ga0059261_1565	0.70	+0.3
1,636,962	-		Ga0059261_1565	0.70	-1.0
1,636,962	-		Ga0059261_1565	0.70	-2.1
1,636,962	-		Ga0059261_1565	0.70	-1.5
1,636,962	-		Ga0059261_1565	0.70	-2.9
1,636,962	-		Ga0059261_1565	0.70	-2.1
1,636,962	-		Ga0059261_1565	0.70	-2.3
1,636,964	+		Ga0059261_1565	0.70	-2.0
1,636,965	-		Ga0059261_1565	0.70	-2.9
1,636,988	+		Ga0059261_1565	0.71	-1.3
1,636,989	-		Ga0059261_1565	0.71	-1.4
1,637,036	+		Ga0059261_1565	0.74	-2.4
1,637,037	-		Ga0059261_1565	0.74	-0.7
1,637,154	+		Ga0059261_1565	0.80	-2.5
1,637,155	-		Ga0059261_1565	0.80	+0.7
1,637,155	-		Ga0059261_1565	0.80	-2.1
1,637,155	-		Ga0059261_1565	0.80	-1.5
1,637,156	+		Ga0059261_1565	0.80	-2.1
1,637,156	+		Ga0059261_1565	0.80	+2.3
1,637,157	-		Ga0059261_1565	0.80	-1.5
1,637,157	-		Ga0059261_1565	0.80	+0.0
1,637,157	-		Ga0059261_1565	0.80	-1.1
1,637,157	-		Ga0059261_1565	0.80	-0.3
1,637,234	+		Ga0059261_1565	0.84	-0.8
1,637,253	-		Ga0059261_1565	0.85	-1.8
1,637,346	+		Ga0059261_1565	0.89	-1.1
1,637,347	-		Ga0059261_1565	0.89	-0.5
1,637,347	-		Ga0059261_1565	0.89	+0.3
1,637,347	-		Ga0059261_1565	0.89	-1.3
1,637,348	+		Ga0059261_1565	0.89	-0.3
1,637,348	+		Ga0059261_1565	0.89	-0.7
1,637,348	+		Ga0059261_1565	0.89	-2.2
1,637,349	-		Ga0059261_1565	0.89	-0.3
1,637,349	-		Ga0059261_1565	0.89	-0.8
1,637,349	-		Ga0059261_1565	0.89	-2.5
1,637,349	-		Ga0059261_1565	0.89	-1.4
1,637,349	-		Ga0059261_1565	0.89	-1.4
1,637,349	-		Ga0059261_1565	0.89	-1.9
1,637,349	-		Ga0059261_1565	0.89	+0.7
1,637,349	-		Ga0059261_1565	0.89	-1.3
1,637,349	-		Ga0059261_1565	0.89	-0.7
1,637,349	-		Ga0059261_1565	0.89	-1.7
1,637,349	-		Ga0059261_1565	0.89	-1.4
1,637,379	+				-1.8
1,637,403	-				-2.1
1,637,403	-				-2.0
1,637,417	+				-1.0
1,637,417	+				+0.0
1,637,418	-				-2.4
1,637,701	+		Ga0059261_1566	0.11	-1.5
1,637,702	-		Ga0059261_1566	0.11	+0.7
1,637,735	-				+0.0
1,637,762	+		Ga0059261_1566	0.16	-1.0
1,637,764	+		Ga0059261_1566	0.17	-1.7
1,637,764	+		Ga0059261_1566	0.17	-0.4
1,637,764	+		Ga0059261_1566	0.17	-1.7
1,637,764	+		Ga0059261_1566	0.17	-1.8
1,637,765	-		Ga0059261_1566	0.17	-2.6
1,637,765	-				+2.3
1,637,765	-		Ga0059261_1566	0.17	-2.4
1,637,765	-		Ga0059261_1566	0.17	-2.6
1,637,828	+		Ga0059261_1566	0.22	-0.5
1,637,829	-		Ga0059261_1566	0.22	+0.4
1,637,829	-		Ga0059261_1566	0.22	+0.5
1,638,050	-		Ga0059261_1566	0.41	-1.0
1,638,128	-		Ga0059261_1566	0.48	-2.0
1,638,128	-				+0.7
1,638,128	-		Ga0059261_1566	0.48	-1.7
1,638,154	+		Ga0059261_1566	0.50	-0.7
1,638,155	-				+0.7
1,638,155	-		Ga0059261_1566	0.50	-2.1
1,638,155	-		Ga0059261_1566	0.50	-0.5
1,638,185	+		Ga0059261_1566	0.53	+0.0
1,638,186	-		Ga0059261_1566	0.53	-0.8
1,638,254	-		Ga0059261_1566	0.59	-0.5
1,638,472	+		Ga0059261_1566	0.77	-2.1
1,638,473	-		Ga0059261_1566	0.77	-0.3
1,638,473	-		Ga0059261_1566	0.77	-1.9
1,638,473	-		Ga0059261_1566	0.77	+0.7
1,638,473	-		Ga0059261_1566	0.77	-0.8
1,638,473	-		Ga0059261_1566	0.77	-0.7
1,638,473	-		Ga0059261_1566	0.77	-1.7
1,638,476	+		Ga0059261_1566	0.78	-1.1
1,638,476	+		Ga0059261_1566	0.78	-1.8
1,638,477	-		Ga0059261_1566	0.78	-1.1
1,638,571	+		Ga0059261_1566	0.86	+0.0
1,638,571	+		Ga0059261_1566	0.86	-0.5
1,638,571	+		Ga0059261_1566	0.86	+0.7
1,638,571	+		Ga0059261_1566	0.86	+0.0
1,638,572	-		Ga0059261_1566	0.86	-1.6
1,638,572	-		Ga0059261_1566	0.86	-1.2
1,638,572	-		Ga0059261_1566	0.86	+0.0
1,638,572	-		Ga0059261_1566	0.86	-0.8
1,638,572	-		Ga0059261_1566	0.86	-0.8
1,638,572	-				+1.0
1,638,787	+				-1.8
1,638,788	-				-0.8
1,638,834	+				+0.0
1,638,834	+				-1.0
1,638,834	+				-0.3
1,638,834	+				-1.5
1,638,834	+				-0.5
1,638,835	-				+1.6
1,638,835	-				-0.7
1,638,835	-				+1.9
1,638,835	-				-1.8
1,638,835	-				+1.1
1,638,835	-				+0.9
1,638,837	+				+2.1
1,638,837	+				-1.1
1,638,837	+				-0.8
1,638,837	+				+5.7
1,638,838	-				-0.7
1,638,838	-				-0.4
1,638,845	-				+0.4
1,638,866	+				-1.3
1,638,866	+				+0.6
1,638,867	-				+0.3
1,638,867	-				-0.1
1,639,014	+		Ga0059261_1567	0.11	-2.1
1,639,014	+		Ga0059261_1567	0.11	-0.0
1,639,014	+		Ga0059261_1567	0.11	+0.1
1,639,015	-		Ga0059261_1567	0.11	-1.7
1,639,015	-		Ga0059261_1567	0.11	-0.8
1,639,086	+		Ga0059261_1567	0.16	+2.1
1,639,086	+		Ga0059261_1567	0.16	+0.9
1,639,086	+		Ga0059261_1567	0.16	+0.3
1,639,087	-		Ga0059261_1567	0.17	-0.0
1,639,087	-		Ga0059261_1567	0.17	+1.2
1,639,087	-		Ga0059261_1567	0.17	+0.5
1,639,087	-		Ga0059261_1567	0.17	-0.6
1,639,087	-		Ga0059261_1567	0.17	+0.7
1,639,243	-		Ga0059261_1567	0.28	+0.3
1,639,328	-		Ga0059261_1567	0.35	-1.5
1,639,361	+		Ga0059261_1567	0.37	-1.4
1,639,377	+		Ga0059261_1567	0.38	-1.0
1,639,377	+		Ga0059261_1567	0.38	+0.3
1,639,378	-		Ga0059261_1567	0.38	-1.3
1,639,491	+		Ga0059261_1567	0.47	+2.3
1,639,621	+		Ga0059261_1567	0.57	-1.2
1,639,622	-		Ga0059261_1567	0.57	-0.1
1,639,622	-		Ga0059261_1567	0.57	-1.0
1,639,717	+		Ga0059261_1567	0.64	+2.8
1,639,717	+		Ga0059261_1567	0.64	-0.7
1,639,718	-		Ga0059261_1567	0.64	-2.3
1,639,718	-		Ga0059261_1567	0.64	-1.0
1,639,718	-		Ga0059261_1567	0.64	+4.2
1,639,718	-		Ga0059261_1567	0.64	-0.1