Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3920

Experiment: sodium iodate 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium iodate 0.005 M
4,555,520	+				-0.3
4,555,521	-				+1.9
4,555,521	-				-0.1
4,555,521	-				-1.2
4,555,521	-				-0.6
4,555,563	+				+0.7
4,555,563	+				+1.0
4,555,563	+				+0.4
4,555,563	+				+1.0
4,555,563	+				+0.4
4,555,563	+				+1.2
4,555,563	+				+1.8
4,555,563	+				-0.7
4,555,563	+				+2.1
4,555,563	+				+0.5
4,555,563	+				-0.4
4,555,563	+				-0.2
4,555,563	+				-0.7
4,555,563	+				+1.1
4,555,563	+				+1.1
4,555,563	+				+0.6
4,555,563	+				-0.7
4,555,563	+				+1.9
4,555,563	+				-0.4
4,555,563	+				+0.2
4,555,563	+				+0.3
4,555,563	+				+2.4
4,555,564	-				+0.1
4,555,564	-				-1.1
4,555,564	-				-0.1
4,555,564	-				-1.5
4,555,564	-				+1.4
4,555,564	-				-0.1
4,555,564	-				+0.2
4,555,564	-				+0.7
4,555,564	-				+0.4
4,555,564	-				+0.2
4,555,564	-				-0.7
4,555,565	+				-0.9
4,555,565	+				-1.0
4,555,566	-				-1.3
4,555,611	-				-1.8
4,555,652	+				+0.4
4,555,652	+				-0.1
4,555,653	-				+0.2
4,555,653	-				-1.5
4,555,653	-				-0.4
4,555,665	+				-0.5
4,555,665	+				+1.0
4,555,666	-				-1.8
4,555,666	-				-2.6
4,555,666	-				-0.6
4,555,666	-				-0.2
4,555,676	+				+0.5
4,555,676	+				+0.5
4,555,676	+				-0.3
4,555,714	+				-1.8
4,555,714	+				-2.5
4,555,715	-				-2.1
4,555,715	-				+0.5
4,555,732	+				-0.9
4,555,733	-				-0.6
4,555,733	-				-0.9
4,555,733	-				-0.5
4,555,845	+		Pf6N2E2_3919	0.18	+1.9
4,555,845	+		Pf6N2E2_3919	0.18	-1.3
4,555,846	-		Pf6N2E2_3919	0.18	-1.6
4,555,846	-		Pf6N2E2_3919	0.18	+0.4
4,555,846	-		Pf6N2E2_3919	0.18	+0.2
4,555,846	-		Pf6N2E2_3919	0.18	-2.1
4,555,846	-		Pf6N2E2_3919	0.18	-0.5
4,555,846	-		Pf6N2E2_3919	0.18	-1.9
4,556,036	+		Pf6N2E2_3919	0.42	-0.3
4,556,037	-		Pf6N2E2_3919	0.42	-0.1
4,556,037	-		Pf6N2E2_3919	0.42	+0.5
4,556,037	-		Pf6N2E2_3919	0.42	-1.0
4,556,064	+		Pf6N2E2_3919	0.46	-0.5
4,556,064	+		Pf6N2E2_3919	0.46	+0.2
4,556,065	-		Pf6N2E2_3919	0.46	-2.1
4,556,065	-		Pf6N2E2_3919	0.46	-1.0
4,556,065	-		Pf6N2E2_3919	0.46	-0.5
4,556,092	+		Pf6N2E2_3919	0.49	-2.3
4,556,093	-		Pf6N2E2_3919	0.49	-1.6
4,556,093	-		Pf6N2E2_3919	0.49	-1.7
4,556,147	+		Pf6N2E2_3919	0.56	-1.0
4,556,178	+		Pf6N2E2_3919	0.60	-3.2
4,556,178	+		Pf6N2E2_3919	0.60	-1.5
4,556,179	-		Pf6N2E2_3919	0.60	-0.8
4,556,179	-		Pf6N2E2_3919	0.60	+2.1
4,556,179	-		Pf6N2E2_3919	0.60	-1.5
4,556,204	-		Pf6N2E2_3919	0.63	-0.7
4,556,226	+		Pf6N2E2_3919	0.66	-0.5
4,556,270	+		Pf6N2E2_3919	0.71	-0.2
4,556,271	-		Pf6N2E2_3919	0.72	-0.2
4,556,311	-		Pf6N2E2_3919	0.77	-2.7
4,556,311	-		Pf6N2E2_3919	0.77	-1.0
4,556,311	-		Pf6N2E2_3919	0.77	-0.9
4,556,447	+				-2.6
4,556,447	+				-2.3
4,556,448	-				-1.1
4,556,472	+				-0.9
4,556,489	+				-1.7
4,556,555	+				-1.6
4,556,555	+				-0.0
4,556,556	-				-0.7
4,556,556	-				-0.5
4,556,558	+				-1.1
4,556,558	+				-0.6
4,556,558	+				-0.5
4,556,558	+				-1.1
4,556,559	-				-1.3
4,556,559	-				-0.7
4,556,559	-				-1.5
4,556,584	+		Pf6N2E2_3920	0.13	+0.1
4,556,669	+		Pf6N2E2_3920	0.26	-2.5
4,556,669	+		Pf6N2E2_3920	0.26	-0.0
4,556,669	+		Pf6N2E2_3920	0.26	-1.5
4,556,669	+		Pf6N2E2_3920	0.26	-1.5
4,556,669	+		Pf6N2E2_3920	0.26	-1.2
4,556,669	+		Pf6N2E2_3920	0.26	-0.6
4,556,669	+		Pf6N2E2_3920	0.26	-2.7
4,556,669	+		Pf6N2E2_3920	0.26	-1.7
4,556,670	-		Pf6N2E2_3920	0.26	+1.1
4,556,670	-		Pf6N2E2_3920	0.26	-1.9
4,556,670	-		Pf6N2E2_3920	0.26	-0.2
4,556,670	-		Pf6N2E2_3920	0.26	-1.6
4,556,670	-		Pf6N2E2_3920	0.26	-0.0
4,556,670	-		Pf6N2E2_3920	0.26	-0.1
4,556,670	-		Pf6N2E2_3920	0.26	-0.7
4,556,670	-		Pf6N2E2_3920	0.26	-2.0
4,556,670	-		Pf6N2E2_3920	0.26	-0.5
4,556,670	-		Pf6N2E2_3920	0.26	-1.3
4,556,670	-		Pf6N2E2_3920	0.26	-2.6
4,556,720	+		Pf6N2E2_3920	0.33	-0.1
4,556,720	+		Pf6N2E2_3920	0.33	-0.0
4,556,720	+		Pf6N2E2_3920	0.33	-0.7
4,556,720	+		Pf6N2E2_3920	0.33	-0.1
4,556,720	+		Pf6N2E2_3920	0.33	-1.5
4,556,720	+		Pf6N2E2_3920	0.33	-1.2
4,556,721	-		Pf6N2E2_3920	0.33	-1.6
4,556,721	-		Pf6N2E2_3920	0.33	-1.4
4,556,721	-		Pf6N2E2_3920	0.33	-2.3
4,556,721	-		Pf6N2E2_3920	0.33	-1.4
4,556,721	-		Pf6N2E2_3920	0.33	-1.8
4,556,723	+		Pf6N2E2_3920	0.34	-2.7
4,556,723	+		Pf6N2E2_3920	0.34	-0.9
4,556,723	+		Pf6N2E2_3920	0.34	+0.3
4,556,723	+		Pf6N2E2_3920	0.34	-0.0
4,556,801	+		Pf6N2E2_3920	0.45	-0.8
4,556,801	+		Pf6N2E2_3920	0.45	-0.4
4,556,801	+		Pf6N2E2_3920	0.45	-1.3
4,556,802	-		Pf6N2E2_3920	0.46	-0.6
4,556,802	-		Pf6N2E2_3920	0.46	-0.3
4,556,802	-		Pf6N2E2_3920	0.46	-1.5
4,556,802	-		Pf6N2E2_3920	0.46	-1.9
4,556,802	-		Pf6N2E2_3920	0.46	-0.6
4,557,062	+		Pf6N2E2_3920	0.85	-1.0
4,557,062	+		Pf6N2E2_3920	0.85	-1.5
4,557,062	+		Pf6N2E2_3920	0.85	-1.4
4,557,062	+		Pf6N2E2_3920	0.85	-1.0
4,557,062	+		Pf6N2E2_3920	0.85	-1.1
4,557,062	+		Pf6N2E2_3920	0.85	-0.1
4,557,062	+		Pf6N2E2_3920	0.85	-1.3
4,557,063	-		Pf6N2E2_3920	0.85	-0.7
4,557,063	-		Pf6N2E2_3920	0.85	-0.4
4,557,063	-		Pf6N2E2_3920	0.85	-1.2
4,557,063	-		Pf6N2E2_3920	0.85	-0.9
4,557,063	-		Pf6N2E2_3920	0.85	-2.4
4,557,063	-		Pf6N2E2_3920	0.85	-1.5
4,557,063	-		Pf6N2E2_3920	0.85	-3.0
4,557,083	+		Pf6N2E2_3920	0.88	+0.9
4,557,083	+		Pf6N2E2_3920	0.88	-0.3
4,557,084	-		Pf6N2E2_3920	0.88	-1.6
4,557,084	-		Pf6N2E2_3920	0.88	-0.7
4,557,084	-		Pf6N2E2_3920	0.88	+0.6
4,557,084	-		Pf6N2E2_3920	0.88	-0.6
4,557,926	+				-0.5
4,557,926	+				-0.1
4,558,039	+				-1.5
4,558,040	-				-2.4
4,558,078	+				-1.3
4,558,079	-				-0.2
4,558,079	-				-1.6
4,558,079	-				-1.7
4,558,088	-				+0.4
4,558,131	+				-1.1
4,558,132	-				-0.8
4,558,132	-				-0.9