Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1642

Experiment: sodium iodate 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium iodate 0.005 M
1,944,803	-		Pf6N2E2_1641	0.13	+1.1
1,945,132	+		Pf6N2E2_1641	0.46	+0.5
1,945,162	+		Pf6N2E2_1641	0.49	-0.6
1,945,162	+		Pf6N2E2_1641	0.49	-0.3
1,945,163	-		Pf6N2E2_1641	0.49	+0.6
1,945,319	-		Pf6N2E2_1641	0.65	+2.9
1,945,570	-		Pf6N2E2_1641	0.90	-0.4
1,945,570	-		Pf6N2E2_1641	0.90	+0.3
1,945,657	-				-1.8
1,945,764	+				+1.1
1,945,966	-		Pf6N2E2_1642	0.31	+0.4
1,945,966	-		Pf6N2E2_1642	0.31	-0.4
1,945,999	-		Pf6N2E2_1642	0.34	+0.5
1,946,067	+		Pf6N2E2_1642	0.41	-2.5
1,946,067	+		Pf6N2E2_1642	0.41	+1.1
1,946,067	+		Pf6N2E2_1642	0.41	+1.5
1,946,067	+		Pf6N2E2_1642	0.41	+0.9
1,946,068	-		Pf6N2E2_1642	0.41	-0.2
1,946,068	-		Pf6N2E2_1642	0.41	+0.9
1,946,131	+		Pf6N2E2_1642	0.48	-0.2
1,946,132	-		Pf6N2E2_1642	0.48	+2.2
1,946,132	-		Pf6N2E2_1642	0.48	-0.4
1,946,283	+		Pf6N2E2_1642	0.64	+1.3
1,946,284	-		Pf6N2E2_1642	0.64	+0.1
1,946,284	-		Pf6N2E2_1642	0.64	-0.2
1,946,284	-		Pf6N2E2_1642	0.64	-0.7
1,946,284	-		Pf6N2E2_1642	0.64	-0.1
1,946,475	+		Pf6N2E2_1642	0.84	+0.4
1,946,475	+		Pf6N2E2_1642	0.84	+1.1
1,946,475	+		Pf6N2E2_1642	0.84	+1.8
1,946,475	+		Pf6N2E2_1642	0.84	-0.2
1,946,476	-		Pf6N2E2_1642	0.84	+0.6
1,946,476	-		Pf6N2E2_1642	0.84	+0.7
1,946,580	+				+0.3
1,946,580	+				+1.9
1,946,583	-				-2.2
1,946,583	-				+0.6
1,946,625	+				-0.3
1,946,625	+				-0.7
1,946,626	-				+1.9
1,946,730	-				-0.2
1,946,759	-				+1.7
1,946,818	+				+0.7
1,946,818	+				+0.9
1,946,818	+				-1.1
1,946,818	+				+1.3
1,946,819	-				-0.8
1,946,819	-				+0.7
1,946,861	-				-1.8
1,946,861	-				+1.2
1,946,861	-				-1.1
1,947,076	-		Pf6N2E2_1643	0.21	-0.4
1,947,125	-		Pf6N2E2_1643	0.24	-0.4
1,947,185	-		Pf6N2E2_1643	0.28	-0.7
1,947,194	-		Pf6N2E2_1643	0.29	-0.5
1,947,194	-		Pf6N2E2_1643	0.29	-0.9
1,947,328	+		Pf6N2E2_1643	0.37	-0.2
1,947,372	+		Pf6N2E2_1643	0.39	-0.2
1,947,372	+		Pf6N2E2_1643	0.39	-0.1
1,947,373	-		Pf6N2E2_1643	0.39	-0.1
1,947,373	-		Pf6N2E2_1643	0.39	+1.3