Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1610 and Dshi_1611 overlap by 4 nucleotides Dshi_1611 and Dshi_1612 overlap by 4 nucleotides Dshi_1612 and Dshi_1613 are separated by 69 nucleotides
Dshi_1610: Dshi_1610 - hypothetical protein (RefSeq), at 1,673,376 to 1,674,959
_1610
Dshi_1611: Dshi_1611 - integrase family protein (RefSeq), at 1,674,956 to 1,675,882
_1611
Dshi_1612: Dshi_1612 - hypothetical protein (RefSeq), at 1,675,879 to 1,676,685
_1612
Dshi_1613: Dshi_1613 - protein of unknown function DUF21 (RefSeq), at 1,676,755 to 1,678,056
_1613
Position (kb)
1674
1675
1676 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1673.984 kb on - strand, within Dshi_1610 at 1674.023 kb on - strand, within Dshi_1610 at 1674.072 kb on + strand, within Dshi_1610 at 1674.241 kb on - strand, within Dshi_1610 at 1674.251 kb on - strand, within Dshi_1610 at 1674.267 kb on + strand, within Dshi_1610 at 1674.292 kb on - strand, within Dshi_1610 at 1674.360 kb on + strand, within Dshi_1610 at 1674.491 kb on + strand, within Dshi_1610 at 1674.491 kb on + strand, within Dshi_1610 at 1674.491 kb on + strand, within Dshi_1610 at 1674.491 kb on + strand, within Dshi_1610 at 1674.491 kb on + strand, within Dshi_1610 at 1674.491 kb on + strand, within Dshi_1610 at 1674.499 kb on - strand, within Dshi_1610 at 1674.499 kb on - strand, within Dshi_1610 at 1674.499 kb on - strand, within Dshi_1610 at 1674.597 kb on - strand, within Dshi_1610 at 1674.701 kb on - strand, within Dshi_1610 at 1674.701 kb on - strand, within Dshi_1610 at 1674.702 kb on + strand, within Dshi_1610 at 1674.773 kb on - strand, within Dshi_1610 at 1674.782 kb on + strand, within Dshi_1610 at 1674.950 kb on + strand at 1675.029 kb on + strand at 1675.031 kb on + strand at 1675.082 kb on - strand, within Dshi_1611 at 1675.096 kb on + strand, within Dshi_1611 at 1675.104 kb on - strand, within Dshi_1611 at 1675.124 kb on + strand, within Dshi_1611 at 1675.214 kb on - strand, within Dshi_1611 at 1675.501 kb on + strand, within Dshi_1611 at 1675.506 kb on - strand, within Dshi_1611 at 1675.509 kb on - strand, within Dshi_1611 at 1675.585 kb on - strand, within Dshi_1611 at 1675.690 kb on + strand, within Dshi_1611 at 1675.884 kb on - strand at 1675.970 kb on + strand, within Dshi_1612 at 1675.973 kb on - strand, within Dshi_1612 at 1675.978 kb on - strand, within Dshi_1612 at 1676.036 kb on + strand, within Dshi_1612 at 1676.322 kb on - strand, within Dshi_1612 at 1676.337 kb on + strand, within Dshi_1612 at 1676.492 kb on - strand, within Dshi_1612 at 1676.521 kb on - strand, within Dshi_1612 at 1676.521 kb on - strand, within Dshi_1612 at 1676.538 kb on + strand, within Dshi_1612 at 1676.692 kb on + strand at 1676.692 kb on + strand at 1676.692 kb on + strand at 1676.693 kb on - strand at 1676.693 kb on - strand at 1676.700 kb on - strand at 1676.700 kb on - strand at 1676.732 kb on + strand at 1676.740 kb on + strand at 1676.748 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 1,673,984 - Dshi_1610 0.38 -1.7 1,674,023 - Dshi_1610 0.41 +0.1 1,674,072 + Dshi_1610 0.44 -0.8 1,674,241 - Dshi_1610 0.55 +0.1 1,674,251 - Dshi_1610 0.55 +0.1 1,674,267 + Dshi_1610 0.56 -1.1 1,674,292 - Dshi_1610 0.58 -0.1 1,674,360 + Dshi_1610 0.62 -3.3 1,674,491 + Dshi_1610 0.70 -0.4 1,674,491 + Dshi_1610 0.70 +1.4 1,674,491 + Dshi_1610 0.70 -1.0 1,674,491 + Dshi_1610 0.70 -0.3 1,674,491 + Dshi_1610 0.70 -0.1 1,674,491 + Dshi_1610 0.70 -0.3 1,674,499 - Dshi_1610 0.71 -0.2 1,674,499 - Dshi_1610 0.71 +0.2 1,674,499 - Dshi_1610 0.71 -0.5 1,674,597 - Dshi_1610 0.77 -4.0 1,674,701 - Dshi_1610 0.84 -0.1 1,674,701 - Dshi_1610 0.84 +0.5 1,674,702 + Dshi_1610 0.84 -0.7 1,674,773 - Dshi_1610 0.88 -0.8 1,674,782 + Dshi_1610 0.89 +0.6 1,674,950 + -0.4 1,675,029 + +0.7 1,675,031 + -2.1 1,675,082 - Dshi_1611 0.14 -2.1 1,675,096 + Dshi_1611 0.15 -0.1 1,675,104 - Dshi_1611 0.16 -0.9 1,675,124 + Dshi_1611 0.18 -0.7 1,675,214 - Dshi_1611 0.28 -2.5 1,675,501 + Dshi_1611 0.59 -0.6 1,675,506 - Dshi_1611 0.59 -0.8 1,675,509 - Dshi_1611 0.60 -0.9 1,675,585 - Dshi_1611 0.68 +0.4 1,675,690 + Dshi_1611 0.79 -2.1 1,675,884 - -0.7 1,675,970 + Dshi_1612 0.11 -0.9 1,675,973 - Dshi_1612 0.12 -0.3 1,675,978 - Dshi_1612 0.12 -0.1 1,676,036 + Dshi_1612 0.19 +0.2 1,676,322 - Dshi_1612 0.55 -0.6 1,676,337 + Dshi_1612 0.57 +0.4 1,676,492 - Dshi_1612 0.76 -0.5 1,676,521 - Dshi_1612 0.80 -0.5 1,676,521 - Dshi_1612 0.80 -0.2 1,676,538 + Dshi_1612 0.82 +0.4 1,676,692 + -0.5 1,676,692 + -0.7 1,676,692 + +0.5 1,676,693 - +0.8 1,676,693 - -0.6 1,676,700 - +0.2 1,676,700 - -0.1 1,676,732 + -0.4 1,676,740 + -0.0 1,676,748 - -1.9
Or see this region's nucleotide sequence