Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5620

Experiment: periodate 0.00125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	periodate 0.00125 M
6,437,131	+		Pf6N2E2_5619	0.53	+0.7
6,437,360	+		Pf6N2E2_5619	0.71	+0.9
6,437,372	+		Pf6N2E2_5619	0.71	-1.2
6,437,372	+		Pf6N2E2_5619	0.71	+0.0
6,437,372	+		Pf6N2E2_5619	0.71	-1.1
6,437,372	+		Pf6N2E2_5619	0.71	+0.3
6,437,373	-		Pf6N2E2_5619	0.72	-0.4
6,437,373	-		Pf6N2E2_5619	0.72	+0.2
6,437,537	+		Pf6N2E2_5619	0.84	-0.0
6,437,537	+		Pf6N2E2_5619	0.84	+0.2
6,437,537	+		Pf6N2E2_5619	0.84	-0.9
6,437,594	+		Pf6N2E2_5619	0.88	-0.8
6,437,594	+		Pf6N2E2_5619	0.88	-0.4
6,437,595	-		Pf6N2E2_5619	0.88	+1.3
6,437,757	+				-0.4
6,437,757	+				-0.4
6,437,758	-				+1.1
6,437,822	+				-0.2
6,437,822	+				+0.6
6,437,822	+				+0.5
6,437,822	+				-1.7
6,437,823	-				-0.5
6,438,029	+		Pf6N2E2_5620	0.47	-3.0
6,438,029	+		Pf6N2E2_5620	0.47	+0.2
6,438,029	+		Pf6N2E2_5620	0.47	-2.2
6,438,029	+		Pf6N2E2_5620	0.47	-1.5
6,438,030	-		Pf6N2E2_5620	0.48	-1.4
6,438,030	-		Pf6N2E2_5620	0.48	-1.3
6,438,030	-		Pf6N2E2_5620	0.48	-1.6
6,438,030	-		Pf6N2E2_5620	0.48	+0.6
6,438,367	+				-0.4
6,438,551	+				-0.4
6,438,551	+				-0.1
6,438,551	+				-0.9
6,438,552	-				-1.0
6,438,554	+				-0.1
6,438,554	+				-0.0
6,438,554	+				+0.1
6,438,555	-				+0.0
6,438,555	-				-0.6
6,438,555	-				+0.3
6,438,561	+				+1.0
6,438,561	+				+0.5
6,438,561	+				+0.4
6,438,561	+				-0.0
6,438,561	+				-0.4
6,438,561	+				+1.2
6,438,562	-				-0.9
6,438,571	-				-0.1
6,438,571	-				+0.4
6,438,578	-				-0.5
6,438,578	-				-1.2
6,438,578	-				-0.0
6,438,578	-				-0.4
6,438,580	+				-0.7
6,438,580	+				-1.6
6,438,580	+				-1.8
6,438,581	-				+1.6
6,438,605	+				-1.0
6,438,605	+				-0.0
6,438,605	+				-0.4
6,438,605	+				+0.8
6,438,605	+				-0.4
6,438,606	-				+0.2
6,438,608	+				-1.3
6,438,608	+				+0.7
6,438,608	+				+0.6
6,438,608	+				-1.3
6,438,608	+				+2.4
6,438,609	-				-1.3
6,438,611	+				-1.4
6,438,694	-		Pf6N2E2_5621	0.15	+0.4
6,438,710	+		Pf6N2E2_5621	0.17	+0.4
6,438,710	+		Pf6N2E2_5621	0.17	+0.8
6,438,923	-		Pf6N2E2_5621	0.48	+0.6
6,438,977	+		Pf6N2E2_5621	0.56	+0.6
6,438,978	-		Pf6N2E2_5621	0.56	+0.7
6,439,124	-		Pf6N2E2_5621	0.78	-1.1
6,439,253	-				-0.1
6,439,253	-				+0.6