Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2498

Experiment: rubidium chloride 0.25 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	rubidium chloride 0.25 M
2,946,684	-				-0.1
2,946,708	+				+0.5
2,946,709	-				-0.7
2,946,732	-				+0.5
2,946,732	-				+0.2
2,946,786	-		Pf6N2E2_2497	0.12	+1.0
2,946,786	-		Pf6N2E2_2497	0.12	-1.2
2,946,920	+		Pf6N2E2_2497	0.28	-0.9
2,946,920	+		Pf6N2E2_2497	0.28	-0.3
2,946,956	+		Pf6N2E2_2497	0.32	-2.8
2,946,956	+		Pf6N2E2_2497	0.32	-0.4
2,946,956	+		Pf6N2E2_2497	0.32	+0.1
2,946,956	+		Pf6N2E2_2497	0.32	+0.0
2,946,957	-		Pf6N2E2_2497	0.32	+1.7
2,946,957	-		Pf6N2E2_2497	0.32	+0.6
2,946,957	-		Pf6N2E2_2497	0.32	-1.0
2,946,957	-		Pf6N2E2_2497	0.32	+0.2
2,946,957	-		Pf6N2E2_2497	0.32	+0.1
2,946,957	-		Pf6N2E2_2497	0.32	-0.0
2,946,957	-		Pf6N2E2_2497	0.32	-0.2
2,946,957	-		Pf6N2E2_2497	0.32	-0.1
2,946,957	-		Pf6N2E2_2497	0.32	+0.2
2,946,972	+		Pf6N2E2_2497	0.34	+0.0
2,946,973	-		Pf6N2E2_2497	0.34	-0.6
2,946,973	-		Pf6N2E2_2497	0.34	+0.9
2,946,993	+		Pf6N2E2_2497	0.37	-1.8
2,946,993	+		Pf6N2E2_2497	0.37	-2.2
2,946,993	+		Pf6N2E2_2497	0.37	+0.3
2,947,106	+		Pf6N2E2_2497	0.50	-0.3
2,947,106	+		Pf6N2E2_2497	0.50	+1.1
2,947,106	+		Pf6N2E2_2497	0.50	+1.0
2,947,106	+		Pf6N2E2_2497	0.50	-0.2
2,947,107	-		Pf6N2E2_2497	0.50	-0.6
2,947,107	-		Pf6N2E2_2497	0.50	-0.1
2,947,242	+		Pf6N2E2_2497	0.66	-0.3
2,947,330	+		Pf6N2E2_2497	0.76	+0.4
2,947,378	+		Pf6N2E2_2497	0.82	+0.1
2,947,379	-		Pf6N2E2_2497	0.82	+0.3
2,947,379	-		Pf6N2E2_2497	0.82	-1.0
2,947,392	+		Pf6N2E2_2497	0.83	+0.1
2,947,392	+		Pf6N2E2_2497	0.83	+0.1
2,947,463	+				+0.0
2,947,464	-				+0.2
2,947,464	-				+0.3
2,947,520	+				+0.1
2,947,529	+				-0.2
2,947,529	+				+0.1
2,947,529	+				-0.2
2,947,529	+				-0.5
2,947,529	+				+0.2
2,947,530	-				-0.1
2,947,530	-				-0.4
2,947,530	-				+0.2
2,947,530	-				-0.8
2,947,530	-				-0.1
2,947,607	+				-0.9
2,947,607	+				+0.2
2,947,667	+		Pf6N2E2_2498	0.18	+1.0
2,947,667	+		Pf6N2E2_2498	0.18	+0.6
2,947,668	-		Pf6N2E2_2498	0.18	+0.4
2,947,668	-				-0.9
2,947,726	+		Pf6N2E2_2498	0.27	+1.4
2,947,726	+		Pf6N2E2_2498	0.27	+0.5
2,947,726	+		Pf6N2E2_2498	0.27	+0.7
2,947,726	+		Pf6N2E2_2498	0.27	+0.7
2,947,771	+		Pf6N2E2_2498	0.34	+1.3
2,947,772	-		Pf6N2E2_2498	0.34	+0.5
2,947,987	+		Pf6N2E2_2498	0.67	+1.0
2,947,988	-		Pf6N2E2_2498	0.67	+0.8
2,948,053	+		Pf6N2E2_2498	0.77	-0.2
2,948,053	+		Pf6N2E2_2498	0.77	+1.2
2,948,053	+		Pf6N2E2_2498	0.77	-0.3
2,948,053	+		Pf6N2E2_2498	0.77	+0.8
2,948,054	-		Pf6N2E2_2498	0.77	-1.3
2,948,065	+		Pf6N2E2_2498	0.79	+1.7
2,948,065	+		Pf6N2E2_2498	0.79	+0.8
2,948,065	+		Pf6N2E2_2498	0.79	+0.8
2,948,087	+		Pf6N2E2_2498	0.82	-0.1
2,948,158	+				-0.8
2,948,193	+				+0.5
2,948,193	+				-0.1
2,948,193	+				+0.2
2,948,193	+				-0.4
2,948,193	+				+2.3
2,948,194	-				-0.1
2,948,194	-				+1.1
2,948,246	+				+1.5
2,948,247	-				-1.5
2,948,253	+				-1.2
2,948,253	+				+0.4
2,948,254	-				+0.1
2,948,254	-				-0.4
2,948,254	-				+2.4
2,948,258	-				-0.3
2,948,540	+		Pf6N2E2_2499	0.54	+0.4
2,948,554	+		Pf6N2E2_2499	0.59	+1.3
2,948,554	+		Pf6N2E2_2499	0.59	-0.4
2,948,554	+		Pf6N2E2_2499	0.59	-1.4
2,948,674	-				-0.4
2,948,679	+				-0.5
2,948,679	+				+1.0
2,948,680	-				-1.1
2,948,680	-				-0.8
2,948,692	+				+0.2
2,948,715	+				+0.9
2,948,716	-				+0.6
2,948,785	+				+0.8
2,948,786	-				-1.0
2,948,797	+				+0.1
2,948,801	+				+1.7
2,949,068	-				-1.2
2,949,128	-				-1.5