Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1574

Experiment: bromate 0.05 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	bromate 0.05 M
1,837,913	+		Pf6N2E2_1573	0.36	-1.6
1,837,914	-		Pf6N2E2_1573	0.36	-1.7
1,837,914	-		Pf6N2E2_1573	0.36	+0.3
1,837,917	-		Pf6N2E2_1573	0.36	-0.5
1,837,917	-		Pf6N2E2_1573	0.36	+0.5
1,837,943	+		Pf6N2E2_1573	0.38	+0.8
1,837,949	+		Pf6N2E2_1573	0.38	+0.6
1,837,949	+		Pf6N2E2_1573	0.38	+1.3
1,837,950	-		Pf6N2E2_1573	0.38	+0.5
1,837,950	-		Pf6N2E2_1573	0.38	+0.0
1,837,950	-		Pf6N2E2_1573	0.38	-0.2
1,837,950	-		Pf6N2E2_1573	0.38	+0.7
1,837,950	-		Pf6N2E2_1573	0.38	+0.2
1,837,950	-		Pf6N2E2_1573	0.38	+0.7
1,837,970	+		Pf6N2E2_1573	0.40	+1.3
1,837,970	+		Pf6N2E2_1573	0.40	-1.1
1,837,971	-		Pf6N2E2_1573	0.40	+0.1
1,837,971	-		Pf6N2E2_1573	0.40	+0.7
1,837,971	-		Pf6N2E2_1573	0.40	-1.1
1,838,079	-		Pf6N2E2_1573	0.48	-0.0
1,838,262	+		Pf6N2E2_1573	0.62	-0.0
1,838,262	+		Pf6N2E2_1573	0.62	-0.5
1,838,262	+		Pf6N2E2_1573	0.62	+0.5
1,838,262	+		Pf6N2E2_1573	0.62	-0.9
1,838,262	+		Pf6N2E2_1573	0.62	+0.4
1,838,263	-		Pf6N2E2_1573	0.62	-0.1
1,838,263	-		Pf6N2E2_1573	0.62	-0.9
1,838,263	-		Pf6N2E2_1573	0.62	-0.2
1,838,294	+		Pf6N2E2_1573	0.65	-0.2
1,838,294	+		Pf6N2E2_1573	0.65	+1.3
1,838,295	-		Pf6N2E2_1573	0.65	+0.2
1,838,300	+		Pf6N2E2_1573	0.65	+0.5
1,838,301	-		Pf6N2E2_1573	0.65	-0.4
1,838,301	-		Pf6N2E2_1573	0.65	-0.4
1,838,430	-		Pf6N2E2_1573	0.75	-0.3
1,838,511	-		Pf6N2E2_1573	0.81	+0.5
1,838,511	-		Pf6N2E2_1573	0.81	-0.5
1,838,511	-		Pf6N2E2_1573	0.81	-0.1
1,838,514	-		Pf6N2E2_1573	0.82	-0.7
1,838,616	-		Pf6N2E2_1573	0.90	+0.1
1,838,616	-		Pf6N2E2_1573	0.90	-0.7
1,838,697	-				-1.5
1,838,697	-				-0.2
1,838,697	-				-0.8
1,838,697	-				-2.5
1,838,751	-				-0.5
1,838,751	-				+1.4
1,838,912	+				-0.1
1,838,960	+		Pf6N2E2_1574	0.11	+0.2
1,838,960	+		Pf6N2E2_1574	0.11	-1.5
1,838,960	+		Pf6N2E2_1574	0.11	+0.2
1,838,960	+		Pf6N2E2_1574	0.11	-1.1
1,838,961	-		Pf6N2E2_1574	0.11	-0.5
1,838,961	-		Pf6N2E2_1574	0.11	+0.5
1,838,961	-		Pf6N2E2_1574	0.11	+0.1
1,838,963	+		Pf6N2E2_1574	0.11	-1.9
1,838,963	+		Pf6N2E2_1574	0.11	-0.5
1,838,988	-		Pf6N2E2_1574	0.13	-1.3
1,839,086	+		Pf6N2E2_1574	0.18	+1.3
1,839,611	-		Pf6N2E2_1574	0.47	+1.1
1,839,743	+		Pf6N2E2_1574	0.55	-0.9
1,839,818	+		Pf6N2E2_1574	0.59	+0.2
1,839,819	-		Pf6N2E2_1574	0.59	+0.3
1,839,821	+		Pf6N2E2_1574	0.59	-0.7
1,839,821	+		Pf6N2E2_1574	0.59	+0.3
1,839,822	-		Pf6N2E2_1574	0.59	-0.5
1,839,822	-		Pf6N2E2_1574	0.59	-0.8
1,839,822	-		Pf6N2E2_1574	0.59	+2.9
1,839,827	+		Pf6N2E2_1574	0.59	-1.6
1,839,827	+		Pf6N2E2_1574	0.59	-1.3
1,839,828	-		Pf6N2E2_1574	0.59	-1.6
1,839,877	-		Pf6N2E2_1574	0.62	-0.9
1,839,959	+		Pf6N2E2_1574	0.67	-0.1
1,839,959	+		Pf6N2E2_1574	0.67	-0.7
1,840,091	+		Pf6N2E2_1574	0.74	+0.1
1,840,092	-		Pf6N2E2_1574	0.74	-2.4
1,840,092	-		Pf6N2E2_1574	0.74	-0.4
1,840,106	+		Pf6N2E2_1574	0.75	+1.6
1,840,107	-		Pf6N2E2_1574	0.75	-2.0
1,840,257	-		Pf6N2E2_1574	0.83	+0.5
1,840,257	-		Pf6N2E2_1574	0.83	-0.6
1,840,257	-		Pf6N2E2_1574	0.83	-0.4
1,840,277	+		Pf6N2E2_1574	0.84	-1.6
1,840,277	+		Pf6N2E2_1574	0.84	-0.1
1,840,335	-		Pf6N2E2_1574	0.87	+0.5
1,840,386	-				-1.3
1,840,387	+				-0.8
1,840,388	-				-0.7
1,840,457	+				-1.9
1,840,457	+				-1.9
1,840,568	+				+0.8
1,840,765	-		Pf6N2E2_1575	0.16	+1.4
1,840,765	-		Pf6N2E2_1575	0.16	-0.5
1,840,936	+				+0.9
1,840,936	+		Pf6N2E2_1575	0.32	+0.6
1,840,937	-		Pf6N2E2_1575	0.32	-0.1
1,840,937	-		Pf6N2E2_1575	0.32	+1.8
1,840,937	-		Pf6N2E2_1575	0.32	-0.1
1,840,937	-		Pf6N2E2_1575	0.32	+3.1
1,841,023	+		Pf6N2E2_1575	0.40	-0.5
1,841,065	-		Pf6N2E2_1575	0.44	+0.7
1,841,065	-		Pf6N2E2_1575	0.44	-1.3
1,841,167	+		Pf6N2E2_1575	0.54	+0.1
1,841,168	-		Pf6N2E2_1575	0.54	-0.4