Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0759 and Shew_0760 are separated by 458 nucleotides Shew_0760 and Shew_0761 overlap by 8 nucleotides Shew_0761 and Shew_0762 are separated by 69 nucleotides
Shew_0759: Shew_0759 - cytochrome c, putative (RefSeq), at 860,299 to 861,120
_0759
Shew_0760: Shew_0760 - response regulator receiver protein (RefSeq), at 861,579 to 862,400
_0760
Shew_0761: Shew_0761 - hypothetical protein (RefSeq), at 862,393 to 862,914
_0761
Shew_0762: Shew_0762 - hypothetical protein (RefSeq), at 862,984 to 864,405
_0762
Position (kb) 861
862
863 Strain fitness (log2 ratio) -1
0
1 at 860.705 kb on + strand, within Shew_0759 at 861.054 kb on - strand at 861.545 kb on + strand at 862.000 kb on + strand, within Shew_0760 at 862.008 kb on - strand, within Shew_0760 at 862.108 kb on + strand, within Shew_0760 at 862.321 kb on + strand at 862.508 kb on + strand, within Shew_0761 at 862.508 kb on + strand, within Shew_0761 at 862.508 kb on + strand, within Shew_0761 at 862.516 kb on - strand, within Shew_0761 at 862.805 kb on - strand, within Shew_0761 at 862.878 kb on + strand at 862.898 kb on + strand at 862.923 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 860,705 + Shew_0759 0.49 -0.1 861,054 - +0.2 861,545 + +0.0 862,000 + Shew_0760 0.51 -0.7 862,008 - Shew_0760 0.52 -0.1 862,108 + Shew_0760 0.64 -0.3 862,321 + -0.0 862,508 + Shew_0761 0.22 +0.0 862,508 + Shew_0761 0.22 -0.2 862,508 + Shew_0761 0.22 -0.2 862,516 - Shew_0761 0.24 +0.1 862,805 - Shew_0761 0.79 -0.2 862,878 + +0.4 862,898 + +0.7 862,923 + +0.2
Or see this region's nucleotide sequence