Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5774

Experiment: Hydroxylamine 0.5 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydroxylamine 0.5 M
6,589,104	+				+0.5
6,589,151	+				-2.5
6,589,363	+		Pf6N2E2_5772	0.38	+0.9
6,589,429	+		Pf6N2E2_5772	0.52	-1.8
6,589,429	+		Pf6N2E2_5772	0.52	-2.5
6,589,429	+		Pf6N2E2_5772	0.52	+0.8
6,589,430	-		Pf6N2E2_5772	0.52	+3.4
6,589,430	-		Pf6N2E2_5772	0.52	+0.5
6,589,461	+		Pf6N2E2_5772	0.59	+2.1
6,589,461	+		Pf6N2E2_5772	0.59	+2.1
6,589,462	-		Pf6N2E2_5772	0.59	-0.5
6,589,700	+				-0.7
6,589,700	-				-1.8
6,589,701	-				-1.1
6,589,701	-				+0.9
6,589,706	+				+0.5
6,589,714	+				+1.8
6,589,715	-				-0.9
6,589,735	+				+0.4
6,589,757	+				+1.2
6,589,932	-		Pf6N2E2_5773	0.53	-1.6
6,589,985	+		Pf6N2E2_5773	0.67	-0.5
6,589,985	+		Pf6N2E2_5773	0.67	-1.8
6,589,985	+		Pf6N2E2_5773	0.67	+2.7
6,589,986	-		Pf6N2E2_5773	0.68	-3.1
6,589,986	-		Pf6N2E2_5773	0.68	-1.5
6,589,986	-		Pf6N2E2_5773	0.68	-0.5
6,590,002	+		Pf6N2E2_5773	0.72	+0.5
6,590,002	+		Pf6N2E2_5773	0.72	+0.1
6,590,003	-		Pf6N2E2_5773	0.72	-1.8
6,590,107	+				-2.4
6,590,107	+				-1.0
6,590,107	+				-1.5
6,590,108	-				-1.0
6,590,176	+		Pf6N2E2_5774	0.20	+1.7
6,590,176	+		Pf6N2E2_5774	0.20	-2.9
6,590,176	+		Pf6N2E2_5774	0.20	-0.3
6,590,176	+		Pf6N2E2_5774	0.20	-2.1
6,590,177	-		Pf6N2E2_5774	0.21	-1.8
6,590,177	-		Pf6N2E2_5774	0.21	-2.0
6,590,177	-		Pf6N2E2_5774	0.21	-1.6
6,590,184	+		Pf6N2E2_5774	0.23	+0.3
6,590,185	-		Pf6N2E2_5774	0.23	-1.3
6,590,356	+		Pf6N2E2_5774	0.69	-0.0
6,590,356	+		Pf6N2E2_5774	0.69	-2.9
6,590,357	-		Pf6N2E2_5774	0.69	-0.1
6,590,357	-		Pf6N2E2_5774	0.69	+0.2
6,590,442	+				-0.9
6,590,443	-				-1.6
6,590,443	-				-2.9
6,590,443	-				+0.5
6,590,625	+		Pf6N2E2_5775	0.38	-3.0
6,590,625	+		Pf6N2E2_5775	0.38	-0.9
6,590,626	-		Pf6N2E2_5775	0.38	+0.3
6,590,626	-		Pf6N2E2_5775	0.38	-0.5
6,590,626	-		Pf6N2E2_5775	0.38	-2.5
6,590,634	-		Pf6N2E2_5775	0.40	+0.0
6,590,634	-		Pf6N2E2_5775	0.40	-2.8
6,590,866	-				-0.2
6,590,872	-				-1.6
6,590,915	-		Pf6N2E2_5776	0.11	-2.2
6,590,954	+		Pf6N2E2_5776	0.45	-0.1
6,590,954	+		Pf6N2E2_5776	0.45	-1.2
6,590,955	-		Pf6N2E2_5776	0.46	-0.1
6,590,955	-		Pf6N2E2_5776	0.46	-0.5
6,590,955	-		Pf6N2E2_5776	0.46	+1.2
6,590,955	-		Pf6N2E2_5776	0.46	-1.1
6,591,122	+				-1.2
6,591,290	-				-0.1
6,591,332	+				+0.3
6,591,332	+				-3.1
6,591,332	+				-0.3
6,591,333	-				-2.3
6,591,453	-				+2.6