Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3223

Experiment: Hydroxylamine 0.5 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydroxylamine 0.5 M
3,728,027	+				-1.6
3,728,027	+				+1.1
3,728,031	+				+1.4
3,728,031	+				+1.0
3,728,031	+				-1.6
3,728,031	+				-0.9
3,728,031	+				-2.0
3,728,032	-				-1.3
3,728,032	-				+0.3
3,728,032	-				+0.7
3,728,036	+				-2.6
3,728,043	-				+1.0
3,728,125	-				+1.5
3,728,273	+		Pf6N2E2_3222	0.25	+0.9
3,728,273	+		Pf6N2E2_3222	0.25	+0.2
3,728,325	-		Pf6N2E2_3222	0.32	-0.1
3,728,396	+		Pf6N2E2_3222	0.41	+0.8
3,728,396	+		Pf6N2E2_3222	0.41	-2.5
3,728,396	+		Pf6N2E2_3222	0.41	+1.4
3,728,396	+		Pf6N2E2_3222	0.41	+1.0
3,728,396	+		Pf6N2E2_3222	0.41	+0.8
3,728,396	+		Pf6N2E2_3222	0.41	+0.5
3,728,396	+		Pf6N2E2_3222	0.41	+1.2
3,728,396	+		Pf6N2E2_3222	0.41	+1.5
3,728,396	+		Pf6N2E2_3222	0.41	-2.7
3,728,396	+		Pf6N2E2_3222	0.41	-0.1
3,728,397	-		Pf6N2E2_3222	0.41	-3.0
3,728,397	-		Pf6N2E2_3222	0.41	-0.9
3,728,397	-		Pf6N2E2_3222	0.41	-0.7
3,728,397	-		Pf6N2E2_3222	0.41	-2.1
3,728,397	-		Pf6N2E2_3222	0.41	+0.2
3,728,397	-		Pf6N2E2_3222	0.41	+1.4
3,728,397	-		Pf6N2E2_3222	0.41	+0.1
3,728,397	-		Pf6N2E2_3222	0.41	+0.1
3,728,399	+		Pf6N2E2_3222	0.41	-2.1
3,728,399	+		Pf6N2E2_3222	0.41	-0.0
3,728,399	+		Pf6N2E2_3222	0.41	+0.6
3,728,399	+		Pf6N2E2_3222	0.41	+1.0
3,728,399	+		Pf6N2E2_3222	0.41	+1.7
3,728,399	+		Pf6N2E2_3222	0.41	-2.4
3,728,400	-		Pf6N2E2_3222	0.42	+1.3
3,728,400	-		Pf6N2E2_3222	0.42	+0.7
3,728,462	+		Pf6N2E2_3222	0.50	+1.0
3,728,462	+		Pf6N2E2_3222	0.50	+0.6
3,728,474	+		Pf6N2E2_3222	0.51	-2.7
3,728,493	-		Pf6N2E2_3222	0.54	-1.5
3,728,496	+		Pf6N2E2_3222	0.54	-1.6
3,728,497	-		Pf6N2E2_3222	0.54	+1.4
3,728,497	-		Pf6N2E2_3222	0.54	+1.2
3,728,676	+		Pf6N2E2_3222	0.78	+0.0
3,728,676	+		Pf6N2E2_3222	0.78	+1.3
3,728,676	+		Pf6N2E2_3222	0.78	+1.0
3,728,677	-		Pf6N2E2_3222	0.78	+0.5
3,728,677	-		Pf6N2E2_3222	0.78	+0.2
3,728,677	-		Pf6N2E2_3222	0.78	-0.9
3,728,677	-		Pf6N2E2_3222	0.78	+1.9
3,728,720	+		Pf6N2E2_3222	0.84	+2.5
3,728,720	+		Pf6N2E2_3222	0.84	+0.4
3,728,779	+				+0.5
3,728,837	+				-1.1
3,728,876	-				-0.7
3,728,876	-				+1.2
3,729,091	+		Pf6N2E2_3223	0.34	+0.5
3,729,091	+		Pf6N2E2_3223	0.34	-1.1
3,729,091	+		Pf6N2E2_3223	0.34	-1.1
3,729,092	-		Pf6N2E2_3223	0.34	-0.8
3,729,092	-		Pf6N2E2_3223	0.34	-2.1
3,729,092	-		Pf6N2E2_3223	0.34	-2.1
3,729,092	-		Pf6N2E2_3223	0.34	-0.2
3,729,092	-		Pf6N2E2_3223	0.34	-2.5
3,729,158	+		Pf6N2E2_3223	0.45	+0.9
3,729,158	+		Pf6N2E2_3223	0.45	-1.1
3,729,158	+		Pf6N2E2_3223	0.45	-1.5
3,729,159	-		Pf6N2E2_3223	0.45	+1.4
3,729,159	-		Pf6N2E2_3223	0.45	-2.9
3,729,159	-		Pf6N2E2_3223	0.45	-0.2
3,729,302	+		Pf6N2E2_3223	0.68	-0.8
3,729,303	-		Pf6N2E2_3223	0.68	-0.8
3,729,330	+		Pf6N2E2_3223	0.72	-1.9
3,729,331	-		Pf6N2E2_3223	0.72	+0.6
3,729,331	-		Pf6N2E2_3223	0.72	+0.9
3,729,338	-		Pf6N2E2_3223	0.73	+2.6
3,729,507	-				+1.6
3,729,531	+				+0.5
3,729,531	+				-1.2
3,729,531	+				-1.2
3,729,532	-				-0.0
3,729,532	-				-2.1
3,729,532	-				-1.4
3,729,603	+				+0.0
3,729,604	-				-0.3
3,729,635	+				+1.2
3,729,659	+				+1.8
3,729,660	-				+2.3
3,729,660	-				+1.7
3,729,683	-		Pf6N2E2_3224	0.11	-0.2
3,729,712	-		Pf6N2E2_3224	0.18	-2.0
3,729,712	-		Pf6N2E2_3224	0.18	+2.2
3,729,713	+		Pf6N2E2_3224	0.18	+2.2
3,729,713	+		Pf6N2E2_3224	0.18	-0.2
3,729,714	-		Pf6N2E2_3224	0.19	-1.8
3,729,993	+		Pf6N2E2_3224	0.86	+0.7
3,730,103	-				+0.4
3,730,289	+				+1.2
3,730,290	-				-1.3
3,730,290	-				+1.1
3,730,441	-		Pf6N2E2_3225	0.20	-2.8
3,730,441	-		Pf6N2E2_3225	0.20	-0.5
3,730,441	-		Pf6N2E2_3225	0.20	+0.2
3,730,441	-		Pf6N2E2_3225	0.20	+1.4
3,730,441	-		Pf6N2E2_3225	0.20	+1.5
3,730,443	+		Pf6N2E2_3225	0.20	+1.8
3,730,443	+		Pf6N2E2_3225	0.20	-1.0
3,730,443	+		Pf6N2E2_3225	0.20	-1.8
3,730,443	+		Pf6N2E2_3225	0.20	+0.7
3,730,443	+		Pf6N2E2_3225	0.20	+0.9
3,730,443	+		Pf6N2E2_3225	0.20	+1.3
3,730,444	-		Pf6N2E2_3225	0.20	+0.9
3,730,444	-		Pf6N2E2_3225	0.20	-2.3
3,730,444	-		Pf6N2E2_3225	0.20	+1.3