Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1107

Experiment: Hydroxylamine 0.5 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydroxylamine 0.5 M
1,293,437	+		Pf6N2E2_1106	0.25	+1.5
1,293,437	+		Pf6N2E2_1106	0.25	+0.8
1,293,496	+		Pf6N2E2_1106	0.31	-0.0
1,293,698	-		Pf6N2E2_1106	0.53	+0.7
1,293,913	+		Pf6N2E2_1106	0.76	-0.8
1,293,914	-		Pf6N2E2_1106	0.76	-1.3
1,293,914	-		Pf6N2E2_1106	0.76	-1.3
1,294,028	+		Pf6N2E2_1106	0.88	-1.5
1,294,028	+		Pf6N2E2_1106	0.88	-0.8
1,294,029	-		Pf6N2E2_1106	0.89	-2.2
1,294,029	-		Pf6N2E2_1106	0.89	-0.0
1,294,199	-				-0.3
1,294,199	-				+0.6
1,294,372	+				-1.0
1,294,372	+				-0.5
1,294,372	+				-0.8
1,294,373	-				+0.9
1,294,373	-				-0.0
1,294,373	-				-1.5
1,294,373	-				-0.3
1,294,373	-				+2.7
1,294,373	-				-1.3
1,294,434	-				-1.0
1,294,584	+				+0.5
1,294,585	-				+0.4
1,294,585	-				+2.5
1,294,824	+		Pf6N2E2_1107	0.11	-0.8
1,294,824	+		Pf6N2E2_1107	0.11	+0.3
1,294,825	-		Pf6N2E2_1107	0.11	+0.0
1,294,825	-		Pf6N2E2_1107	0.11	+1.2
1,294,825	-		Pf6N2E2_1107	0.11	-0.1
1,294,833	+		Pf6N2E2_1107	0.11	+0.7
1,294,833	+		Pf6N2E2_1107	0.11	-1.8
1,294,834	-		Pf6N2E2_1107	0.11	-0.6
1,294,834	-		Pf6N2E2_1107	0.11	-1.5
1,294,917	+		Pf6N2E2_1107	0.13	-0.7
1,294,918	-		Pf6N2E2_1107	0.13	-0.5
1,295,047	+		Pf6N2E2_1107	0.15	-1.3
1,295,242	+		Pf6N2E2_1107	0.19	+1.3
1,295,242	+		Pf6N2E2_1107	0.19	+2.2
1,295,423	+		Pf6N2E2_1107	0.23	+1.0
1,295,607	+		Pf6N2E2_1107	0.26	+0.2
1,295,608	-		Pf6N2E2_1107	0.26	-0.0
1,295,624	+		Pf6N2E2_1107	0.27	-0.7
1,295,625	-		Pf6N2E2_1107	0.27	-1.0
1,295,669	+		Pf6N2E2_1107	0.28	-1.0
1,295,669	+		Pf6N2E2_1107	0.28	-0.2
1,295,669	+		Pf6N2E2_1107	0.28	-0.0
1,295,886	+		Pf6N2E2_1107	0.32	-1.2
1,296,526	-		Pf6N2E2_1107	0.44	+0.3
1,296,838	+		Pf6N2E2_1107	0.51	+0.3
1,296,838	+		Pf6N2E2_1107	0.51	-1.0
1,297,180	-		Pf6N2E2_1107	0.57	+0.7
1,297,447	-		Pf6N2E2_1107	0.62	-2.0
1,297,447	-		Pf6N2E2_1107	0.62	-2.6
1,297,683	-		Pf6N2E2_1107	0.67	-4.0
1,298,009	-		Pf6N2E2_1107	0.73	-0.0
1,298,009	-		Pf6N2E2_1107	0.73	-1.5
1,298,095	+		Pf6N2E2_1107	0.75	-0.6
1,298,322	-		Pf6N2E2_1107	0.80	-0.6
1,298,322	-		Pf6N2E2_1107	0.80	-0.2
1,298,345	+		Pf6N2E2_1107	0.80	-3.1
1,298,345	+		Pf6N2E2_1107	0.80	+1.5
1,298,346	-		Pf6N2E2_1107	0.80	+0.4
1,298,407	-		Pf6N2E2_1107	0.81	+0.5
1,298,589	+		Pf6N2E2_1107	0.85	-0.3
1,298,589	+		Pf6N2E2_1107	0.85	+1.4
1,298,590	-		Pf6N2E2_1107	0.85	+0.1
1,298,590	-		Pf6N2E2_1107	0.85	+3.5
1,298,592	+		Pf6N2E2_1107	0.85	-2.9
1,298,592	+		Pf6N2E2_1107	0.85	+0.2
1,298,592	+		Pf6N2E2_1107	0.85	-2.0
1,298,593	-		Pf6N2E2_1107	0.85	+0.8
1,298,613	+		Pf6N2E2_1107	0.85	+0.8
1,298,613	+		Pf6N2E2_1107	0.85	+0.5
1,298,613	+		Pf6N2E2_1107	0.85	+0.2
1,298,614	-		Pf6N2E2_1107	0.85	-0.9
1,298,614	-		Pf6N2E2_1107	0.85	-0.3
1,298,614	-		Pf6N2E2_1107	0.85	-0.8
1,298,614	-		Pf6N2E2_1107	0.85	-1.5
1,298,614	-		Pf6N2E2_1107	0.85	+0.1
1,298,614	-		Pf6N2E2_1107	0.85	+0.4
1,298,614	-		Pf6N2E2_1107	0.85	+1.0
1,298,818	-		Pf6N2E2_1107	0.89	-0.3
1,298,831	-		Pf6N2E2_1107	0.90	+1.1
1,299,088	+				-2.5
1,299,267	+				+0.0
1,299,267	+				+1.7
1,299,267	+				+0.3
1,299,267	+				-1.2
1,299,267	+				-2.4
1,299,267	+				-1.6
1,299,268	-				+0.4
1,299,268	-				+1.1
1,299,268	-				+1.0
1,299,268	-				+1.1
1,299,268	-				+2.1
1,299,357	+				+1.1
1,299,667	+		Pf6N2E2_1108	0.29	+1.2
1,300,049	-		Pf6N2E2_1108	0.65	-1.0
1,300,059	+		Pf6N2E2_1108	0.66	+1.9
1,300,070	+		Pf6N2E2_1108	0.67	-0.6
1,300,103	+		Pf6N2E2_1108	0.70	-3.2
1,300,103	+		Pf6N2E2_1108	0.70	-1.3
1,300,103	+		Pf6N2E2_1108	0.70	-1.7
1,300,104	-		Pf6N2E2_1108	0.70	+0.8
1,300,359	+				+0.3
1,300,359	+				-2.5