Strain Fitness in Shewanella loihica PV-4 around Shew_2160
Experiment: Bacitracin 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.125 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,506,376 | - | Shew_2159 | 0.86 | -0.0 | |
| 2,506,518 | + | +0.2 | |||
| 2,507,370 | + | Shew_2160 | 0.37 | -0.2 | |
| 2,507,614 | - | Shew_2160 | 0.51 | -0.3 | |
| 2,507,873 | + | Shew_2160 | 0.66 | -0.4 | |
| 2,508,154 | + | Shew_2160 | 0.82 | -0.4 | |
| 2,508,179 | + | Shew_2160 | 0.84 | -0.7 | |
| 2,508,179 | + | Shew_2160 | 0.84 | -0.1 | |
| 2,508,195 | - | Shew_2160 | 0.85 | +0.1 | |
| 2,508,328 | + | +0.5 | |||
| 2,508,417 | - | +0.3 | |||
| 2,508,611 | - | +0.3 | |||
| 2,508,734 | - | -0.2 | |||
| 2,508,948 | - | Shew_2161 | 0.10 | -0.0 | |
| 2,509,069 | - | Shew_2161 | 0.16 | +0.3 | |
| 2,509,082 | + | Shew_2161 | 0.17 | +0.2 | |
| 2,509,208 | - | Shew_2161 | 0.22 | +0.4 | |
| 2,509,218 | - | Shew_2161 | 0.23 | +0.1 | |
| 2,509,308 | - | Shew_2161 | 0.27 | +0.0 | |
| 2,509,431 | + | Shew_2161 | 0.33 | +0.1 |
Or see this region's nucleotide sequence