Strain Fitness in Shewanella loihica PV-4 around Shew_3621

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,318,453	+		Shew_3620	0.52	-2.2
4,318,462	+		Shew_3620	0.53	-1.8
4,318,470	-		Shew_3620	0.54	-2.7
4,318,492	+		Shew_3620	0.56	+0.0
4,318,492	+		Shew_3620	0.56	+1.1
4,318,492	+		Shew_3620	0.56	-2.5
4,318,500	-		Shew_3620	0.57	+1.5
4,318,500	-		Shew_3620	0.57	-1.9
4,318,543	+		Shew_3620	0.62	-0.9
4,318,634	-		Shew_3620	0.72	+1.0
4,318,917	-				+0.1
4,318,924	-				+0.0
4,318,954	+				+0.2
4,318,983	+				-0.3
4,319,046	-				+0.5
4,319,047	+				-0.1
4,319,140	-				-0.0
4,319,218	-		Shew_3621	0.16	+0.1
4,319,305	-		Shew_3621	0.38	+2.4
4,319,661	+	hslO	Shew_3622	0.12	+0.3
4,319,661	+	hslO	Shew_3622	0.12	+0.4
4,319,669	-	hslO	Shew_3622	0.13	+0.3
4,319,669	-	hslO	Shew_3622	0.13	+0.4
4,320,014	-	hslO	Shew_3622	0.53	+0.6
4,320,087	-	hslO	Shew_3622	0.61	+0.6
4,320,174	-	hslO	Shew_3622	0.71	-0.1
4,320,320	-	hslO	Shew_3622	0.88	+0.1