Experiment: tungstate 0.05 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3909 and Pf6N2E2_3910 are separated by 21 nucleotides Pf6N2E2_3910 and Pf6N2E2_3911 overlap by 4 nucleotides Pf6N2E2_3911 and Pf6N2E2_3912 are separated by 49 nucleotides
Pf6N2E2_3909 - Taurine-binding periplasmic protein TauA, at 4,544,631 to 4,545,608
_3909
Pf6N2E2_3910 - Taurine transport ATP-binding protein TauB, at 4,545,630 to 4,546,424
_3910
Pf6N2E2_3911 - Taurine transport system permease protein TauC, at 4,546,421 to 4,547,260
_3911
Pf6N2E2_3912 - Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17), at 4,547,310 to 4,548,152
_3912
Position (kb)
4545
4546
4547 Strain fitness (log2 ratio)
-1
0
1
2 at 4544.770 kb on - strand, within Pf6N2E2_3909 at 4545.045 kb on + strand, within Pf6N2E2_3909 at 4545.046 kb on - strand, within Pf6N2E2_3909 at 4545.046 kb on - strand, within Pf6N2E2_3909 at 4545.046 kb on - strand, within Pf6N2E2_3909 at 4545.046 kb on - strand, within Pf6N2E2_3909 at 4545.100 kb on + strand, within Pf6N2E2_3909 at 4545.162 kb on + strand, within Pf6N2E2_3909 at 4545.162 kb on + strand, within Pf6N2E2_3909 at 4545.162 kb on + strand, within Pf6N2E2_3909 at 4545.162 kb on + strand, within Pf6N2E2_3909 at 4545.162 kb on + strand, within Pf6N2E2_3909 at 4545.163 kb on - strand, within Pf6N2E2_3909 at 4545.163 kb on - strand, within Pf6N2E2_3909 at 4545.163 kb on - strand, within Pf6N2E2_3909 at 4545.163 kb on - strand, within Pf6N2E2_3909 at 4545.163 kb on - strand, within Pf6N2E2_3909 at 4545.163 kb on - strand, within Pf6N2E2_3909 at 4545.336 kb on + strand, within Pf6N2E2_3909 at 4545.336 kb on + strand, within Pf6N2E2_3909 at 4545.570 kb on + strand at 4545.571 kb on - strand at 4545.571 kb on - strand at 4545.580 kb on - strand at 4545.594 kb on + strand at 4545.594 kb on + strand at 4545.594 kb on + strand at 4545.594 kb on + strand at 4545.594 kb on + strand at 4545.594 kb on + strand at 4545.594 kb on + strand at 4545.595 kb on - strand at 4545.595 kb on - strand at 4545.595 kb on - strand at 4545.595 kb on - strand at 4545.595 kb on - strand at 4545.595 kb on - strand at 4545.595 kb on - strand at 4545.595 kb on - strand at 4545.667 kb on - strand at 4545.667 kb on - strand at 4546.016 kb on + strand, within Pf6N2E2_3910 at 4546.017 kb on - strand, within Pf6N2E2_3910 at 4546.150 kb on + strand, within Pf6N2E2_3910 at 4546.150 kb on + strand, within Pf6N2E2_3910 at 4546.150 kb on + strand, within Pf6N2E2_3910 at 4546.150 kb on + strand, within Pf6N2E2_3910 at 4546.150 kb on + strand, within Pf6N2E2_3910 at 4546.151 kb on - strand, within Pf6N2E2_3910 at 4546.151 kb on - strand, within Pf6N2E2_3910 at 4546.279 kb on + strand, within Pf6N2E2_3910 at 4546.280 kb on - strand, within Pf6N2E2_3910 at 4546.280 kb on - strand, within Pf6N2E2_3910 at 4546.431 kb on - strand at 4546.485 kb on + strand at 4546.486 kb on - strand at 4546.486 kb on - strand at 4546.644 kb on - strand, within Pf6N2E2_3911 at 4546.797 kb on - strand, within Pf6N2E2_3911 at 4546.821 kb on - strand, within Pf6N2E2_3911 at 4546.880 kb on + strand, within Pf6N2E2_3911 at 4546.880 kb on + strand, within Pf6N2E2_3911 at 4546.880 kb on + strand, within Pf6N2E2_3911 at 4546.951 kb on - strand, within Pf6N2E2_3911
Per-strain Table
Position Strand Gene LocusTag Fraction tungstate 0.05 M remove 4,544,770 - Pf6N2E2_3909 0.14 +0.3 4,545,045 + Pf6N2E2_3909 0.42 -0.3 4,545,046 - Pf6N2E2_3909 0.42 +1.4 4,545,046 - Pf6N2E2_3909 0.42 +1.0 4,545,046 - Pf6N2E2_3909 0.42 -0.9 4,545,046 - Pf6N2E2_3909 0.42 +0.6 4,545,100 + Pf6N2E2_3909 0.48 -0.4 4,545,162 + Pf6N2E2_3909 0.54 -0.9 4,545,162 + Pf6N2E2_3909 0.54 -0.0 4,545,162 + Pf6N2E2_3909 0.54 +0.8 4,545,162 + Pf6N2E2_3909 0.54 +0.2 4,545,162 + Pf6N2E2_3909 0.54 -1.0 4,545,163 - Pf6N2E2_3909 0.54 -0.1 4,545,163 - Pf6N2E2_3909 0.54 -0.5 4,545,163 - Pf6N2E2_3909 0.54 -0.2 4,545,163 - Pf6N2E2_3909 0.54 -1.7 4,545,163 - Pf6N2E2_3909 0.54 -0.3 4,545,163 - Pf6N2E2_3909 0.54 +0.1 4,545,336 + Pf6N2E2_3909 0.72 +0.1 4,545,336 + Pf6N2E2_3909 0.72 +0.1 4,545,570 + +0.4 4,545,571 - -0.1 4,545,571 - +2.1 4,545,580 - +0.5 4,545,594 + +0.2 4,545,594 + -0.1 4,545,594 + -0.4 4,545,594 + -0.5 4,545,594 + -0.9 4,545,594 + +0.1 4,545,594 + -0.5 4,545,595 - +1.1 4,545,595 - -0.4 4,545,595 - +0.5 4,545,595 - +0.0 4,545,595 - -0.6 4,545,595 - -0.6 4,545,595 - +0.1 4,545,595 - +0.1 4,545,667 - +0.8 4,545,667 - -0.7 4,546,016 + Pf6N2E2_3910 0.49 +0.6 4,546,017 - Pf6N2E2_3910 0.49 +1.2 4,546,150 + Pf6N2E2_3910 0.65 +0.8 4,546,150 + Pf6N2E2_3910 0.65 +0.3 4,546,150 + Pf6N2E2_3910 0.65 +1.2 4,546,150 + Pf6N2E2_3910 0.65 +1.6 4,546,150 + Pf6N2E2_3910 0.65 -0.1 4,546,151 - Pf6N2E2_3910 0.66 -0.1 4,546,151 - Pf6N2E2_3910 0.66 +0.6 4,546,279 + Pf6N2E2_3910 0.82 -0.6 4,546,280 - Pf6N2E2_3910 0.82 +0.9 4,546,280 - Pf6N2E2_3910 0.82 +1.1 4,546,431 - +0.5 4,546,485 + +0.4 4,546,486 - +0.3 4,546,486 - -0.4 4,546,644 - Pf6N2E2_3911 0.27 -1.4 4,546,797 - Pf6N2E2_3911 0.45 +0.2 4,546,821 - Pf6N2E2_3911 0.48 +0.6 4,546,880 + Pf6N2E2_3911 0.55 +0.5 4,546,880 + Pf6N2E2_3911 0.55 +0.3 4,546,880 + Pf6N2E2_3911 0.55 +0.7 4,546,951 - Pf6N2E2_3911 0.63 -0.3
Or see this region's nucleotide sequence