Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_6052

Experiment: Fluorophosphate 0.125 M

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPf6N2E2_6051 and Pf6N2E2_6052 are separated by 47 nucleotidesPf6N2E2_6052 and Pf6N2E2_6053 are separated by 60 nucleotides Pf6N2E2_6051 - Transcriptional regulator, LysR family, at 6,869,763 to 6,870,686 _6051 Pf6N2E2_6052 - Hydantoin racemase (EC 5.1.99.-), at 6,870,734 to 6,871,462 _6052 Pf6N2E2_6053 - Hydantoin permease, at 6,871,523 to 6,873,052 _6053 Position (kb) 6870 6871 6872Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 6869.864 kb on + strand, within Pf6N2E2_6051at 6869.865 kb on - strand, within Pf6N2E2_6051at 6869.900 kb on - strand, within Pf6N2E2_6051at 6870.078 kb on + strand, within Pf6N2E2_6051at 6870.078 kb on + strand, within Pf6N2E2_6051at 6870.078 kb on + strand, within Pf6N2E2_6051at 6870.078 kb on + strand, within Pf6N2E2_6051at 6870.078 kb on + strand, within Pf6N2E2_6051at 6870.078 kb on + strand, within Pf6N2E2_6051at 6870.078 kb on + strand, within Pf6N2E2_6051at 6870.078 kb on + strand, within Pf6N2E2_6051at 6870.078 kb on + strand, within Pf6N2E2_6051at 6870.079 kb on - strand, within Pf6N2E2_6051at 6870.079 kb on - strand, within Pf6N2E2_6051at 6870.079 kb on - strand, within Pf6N2E2_6051at 6870.079 kb on - strand, within Pf6N2E2_6051at 6870.079 kb on - strand, within Pf6N2E2_6051at 6870.079 kb on - strand, within Pf6N2E2_6051at 6870.079 kb on - strand, within Pf6N2E2_6051at 6870.079 kb on - strand, within Pf6N2E2_6051at 6870.079 kb on - strand, within Pf6N2E2_6051at 6870.157 kb on + strand, within Pf6N2E2_6051at 6870.553 kb on - strand, within Pf6N2E2_6051at 6870.553 kb on - strand, within Pf6N2E2_6051at 6870.579 kb on + strand, within Pf6N2E2_6051at 6870.579 kb on + strand, within Pf6N2E2_6051at 6870.579 kb on + strand, within Pf6N2E2_6051at 6870.579 kb on + strand, within Pf6N2E2_6051at 6870.579 kb on + strand, within Pf6N2E2_6051at 6870.579 kb on + strand, within Pf6N2E2_6051at 6870.580 kb on - strand, within Pf6N2E2_6051at 6870.580 kb on - strand, within Pf6N2E2_6051at 6870.580 kb on - strand, within Pf6N2E2_6051at 6870.582 kb on + strand, within Pf6N2E2_6051at 6870.583 kb on - strand, within Pf6N2E2_6051at 6870.790 kb on - strandat 6871.109 kb on - strand, within Pf6N2E2_6052at 6871.134 kb on + strand, within Pf6N2E2_6052at 6871.272 kb on + strand, within Pf6N2E2_6052at 6871.272 kb on + strand, within Pf6N2E2_6052at 6871.273 kb on - strand, within Pf6N2E2_6052at 6871.312 kb on - strand, within Pf6N2E2_6052at 6871.312 kb on - strand, within Pf6N2E2_6052at 6871.489 kb on + strandat 6871.573 kb on - strandat 6871.681 kb on + strand, within Pf6N2E2_6053at 6871.682 kb on - strand, within Pf6N2E2_6053at 6871.749 kb on + strand, within Pf6N2E2_6053at 6871.749 kb on + strand, within Pf6N2E2_6053at 6871.750 kb on - strand, within Pf6N2E2_6053at 6871.750 kb on - strand, within Pf6N2E2_6053at 6871.750 kb on - strand, within Pf6N2E2_6053at 6871.750 kb on - strand, within Pf6N2E2_6053at 6871.750 kb on - strand, within Pf6N2E2_6053at 6871.773 kb on + strand, within Pf6N2E2_6053at 6871.875 kb on + strand, within Pf6N2E2_6053at 6871.875 kb on + strand, within Pf6N2E2_6053at 6871.875 kb on + strand, within Pf6N2E2_6053at 6871.876 kb on - strand, within Pf6N2E2_6053at 6871.876 kb on - strand, within Pf6N2E2_6053at 6871.876 kb on - strand, within Pf6N2E2_6053at 6871.876 kb on - strand, within Pf6N2E2_6053at 6871.876 kb on - strand, within Pf6N2E2_6053at 6871.899 kb on + strand, within Pf6N2E2_6053at 6871.899 kb on + strand, within Pf6N2E2_6053at 6871.968 kb on + strand, within Pf6N2E2_6053at 6871.968 kb on + strand, within Pf6N2E2_6053at 6871.968 kb on + strand, within Pf6N2E2_6053at 6872.280 kb on + strand, within Pf6N2E2_6053at 6872.314 kb on + strand, within Pf6N2E2_6053at 6872.315 kb on - strand, within Pf6N2E2_6053at 6872.315 kb on - strand, within Pf6N2E2_6053at 6872.315 kb on - strand, within Pf6N2E2_6053at 6872.385 kb on + strand, within Pf6N2E2_6053at 6872.385 kb on + strand, within Pf6N2E2_6053at 6872.385 kb on + strand, within Pf6N2E2_6053at 6872.385 kb on + strand, within Pf6N2E2_6053at 6872.385 kb on + strand, within Pf6N2E2_6053at 6872.385 kb on + strand, within Pf6N2E2_6053at 6872.385 kb on + strand, within Pf6N2E2_6053at 6872.385 kb on + strand, within Pf6N2E2_6053at 6872.385 kb on + strand, within Pf6N2E2_6053at 6872.385 kb on + strand, within Pf6N2E2_6053at 6872.386 kb on - strand, within Pf6N2E2_6053at 6872.386 kb on - strand, within Pf6N2E2_6053at 6872.386 kb on - strand, within Pf6N2E2_6053at 6872.386 kb on - strand, within Pf6N2E2_6053at 6872.386 kb on - strand, within Pf6N2E2_6053at 6872.386 kb on - strand, within Pf6N2E2_6053at 6872.386 kb on - strand, within Pf6N2E2_6053at 6872.386 kb on - strand, within Pf6N2E2_6053at 6872.386 kb on - strand, within Pf6N2E2_6053at 6872.386 kb on - strand, within Pf6N2E2_6053

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Per-strain Table

Position Strand Gene LocusTag Fraction Fluorophosphate 0.125 M
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6,869,864 + Pf6N2E2_6051 0.11 -1.2
6,869,865 - Pf6N2E2_6051 0.11 +1.3
6,869,900 - Pf6N2E2_6051 0.15 +0.7
6,870,078 + Pf6N2E2_6051 0.34 -1.2
6,870,078 + Pf6N2E2_6051 0.34 -1.4
6,870,078 + Pf6N2E2_6051 0.34 +0.6
6,870,078 + Pf6N2E2_6051 0.34 +1.0
6,870,078 + Pf6N2E2_6051 0.34 +0.1
6,870,078 + Pf6N2E2_6051 0.34 +1.1
6,870,078 + Pf6N2E2_6051 0.34 -1.1
6,870,078 + Pf6N2E2_6051 0.34 -0.4
6,870,078 + Pf6N2E2_6051 0.34 -0.6
6,870,079 - Pf6N2E2_6051 0.34 +0.8
6,870,079 - Pf6N2E2_6051 0.34 +1.1
6,870,079 - Pf6N2E2_6051 0.34 -0.5
6,870,079 - Pf6N2E2_6051 0.34 -0.1
6,870,079 - Pf6N2E2_6051 0.34 -0.2
6,870,079 - Pf6N2E2_6051 0.34 +1.0
6,870,079 - Pf6N2E2_6051 0.34 +0.7
6,870,079 - Pf6N2E2_6051 0.34 -0.6
6,870,079 - Pf6N2E2_6051 0.34 -0.1
6,870,157 + Pf6N2E2_6051 0.43 -0.2
6,870,553 - Pf6N2E2_6051 0.85 +0.5
6,870,553 - Pf6N2E2_6051 0.85 +0.3
6,870,579 + Pf6N2E2_6051 0.88 -0.6
6,870,579 + Pf6N2E2_6051 0.88 -2.0
6,870,579 + Pf6N2E2_6051 0.88 +0.3
6,870,579 + Pf6N2E2_6051 0.88 -0.8
6,870,579 + Pf6N2E2_6051 0.88 -1.3
6,870,579 + Pf6N2E2_6051 0.88 +0.3
6,870,580 - Pf6N2E2_6051 0.88 -0.4
6,870,580 - Pf6N2E2_6051 0.88 -0.5
6,870,580 - Pf6N2E2_6051 0.88 -0.4
6,870,582 + Pf6N2E2_6051 0.89 -1.9
6,870,583 - Pf6N2E2_6051 0.89 +0.1
6,870,790 - +1.4
6,871,109 - Pf6N2E2_6052 0.51 -0.5
6,871,134 + Pf6N2E2_6052 0.55 -1.1
6,871,272 + Pf6N2E2_6052 0.74 -0.0
6,871,272 + Pf6N2E2_6052 0.74 +0.4
6,871,273 - Pf6N2E2_6052 0.74 -1.0
6,871,312 - Pf6N2E2_6052 0.79 -1.1
6,871,312 - Pf6N2E2_6052 0.79 -0.9
6,871,489 + -0.1
6,871,573 - +0.0
6,871,681 + Pf6N2E2_6053 0.10 +1.1
6,871,682 - Pf6N2E2_6053 0.10 -3.0
6,871,749 + Pf6N2E2_6053 0.15 +0.2
6,871,749 + Pf6N2E2_6053 0.15 -1.5
6,871,750 - Pf6N2E2_6053 0.15 +2.6
6,871,750 - Pf6N2E2_6053 0.15 +1.3
6,871,750 - Pf6N2E2_6053 0.15 -2.0
6,871,750 - Pf6N2E2_6053 0.15 -0.1
6,871,750 - Pf6N2E2_6053 0.15 +0.8
6,871,773 + Pf6N2E2_6053 0.16 +0.2
6,871,875 + Pf6N2E2_6053 0.23 +2.5
6,871,875 + Pf6N2E2_6053 0.23 +1.4
6,871,875 + Pf6N2E2_6053 0.23 -1.2
6,871,876 - Pf6N2E2_6053 0.23 +1.0
6,871,876 - Pf6N2E2_6053 0.23 -0.0
6,871,876 - Pf6N2E2_6053 0.23 -0.9
6,871,876 - Pf6N2E2_6053 0.23 -1.2
6,871,876 - Pf6N2E2_6053 0.23 -1.1
6,871,899 + Pf6N2E2_6053 0.25 +1.2
6,871,899 + Pf6N2E2_6053 0.25 +1.5
6,871,968 + Pf6N2E2_6053 0.29 +0.1
6,871,968 + Pf6N2E2_6053 0.29 -1.1
6,871,968 + Pf6N2E2_6053 0.29 -0.7
6,872,280 + Pf6N2E2_6053 0.49 +0.9
6,872,314 + Pf6N2E2_6053 0.52 +0.6
6,872,315 - Pf6N2E2_6053 0.52 +0.9
6,872,315 - Pf6N2E2_6053 0.52 +1.0
6,872,315 - Pf6N2E2_6053 0.52 -0.0
6,872,385 + Pf6N2E2_6053 0.56 +1.4
6,872,385 + Pf6N2E2_6053 0.56 +2.0
6,872,385 + Pf6N2E2_6053 0.56 +1.5
6,872,385 + Pf6N2E2_6053 0.56 -1.3
6,872,385 + Pf6N2E2_6053 0.56 -0.7
6,872,385 + Pf6N2E2_6053 0.56 +0.8
6,872,385 + Pf6N2E2_6053 0.56 +0.8
6,872,385 + Pf6N2E2_6053 0.56 +1.6
6,872,385 + Pf6N2E2_6053 0.56 -0.0
6,872,385 + Pf6N2E2_6053 0.56 +2.4
6,872,386 - Pf6N2E2_6053 0.56 +0.3
6,872,386 - Pf6N2E2_6053 0.56 +0.7
6,872,386 - Pf6N2E2_6053 0.56 +0.8
6,872,386 - Pf6N2E2_6053 0.56 +2.3
6,872,386 - Pf6N2E2_6053 0.56 +0.8
6,872,386 - Pf6N2E2_6053 0.56 +0.5
6,872,386 - Pf6N2E2_6053 0.56 -1.2
6,872,386 - Pf6N2E2_6053 0.56 +0.0
6,872,386 - Pf6N2E2_6053 0.56 +1.0
6,872,386 - Pf6N2E2_6053 0.56 +0.1

Or see this region's nucleotide sequence