Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS14750

Experiment: Growth at 34C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Growth at 34C
3,298,869	+		PFLU_RS14745	0.50	-2.4
3,298,869	+		PFLU_RS14745	0.50	-0.5
3,298,872	-		PFLU_RS14745	0.50	+0.7
3,298,958	+		PFLU_RS14745	0.56	-0.1
3,298,959	-		PFLU_RS14745	0.56	+0.7
3,298,973	+		PFLU_RS14745	0.57	-0.8
3,298,974	-		PFLU_RS14745	0.57	-0.1
3,299,009	+		PFLU_RS14745	0.60	+3.2
3,299,009	+		PFLU_RS14745	0.60	-0.0
3,299,009	+		PFLU_RS14745	0.60	+0.3
3,299,009	+		PFLU_RS14745	0.60	-0.3
3,299,010	-		PFLU_RS14745	0.60	-0.9
3,299,129	+		PFLU_RS14745	0.68	+1.2
3,299,129	+		PFLU_RS14745	0.68	-0.7
3,299,129	+		PFLU_RS14745	0.68	-0.3
3,299,129	+		PFLU_RS14745	0.68	-0.3
3,299,129	+		PFLU_RS14745	0.68	-0.7
3,299,129	+		PFLU_RS14745	0.68	-0.4
3,299,130	-		PFLU_RS14745	0.68	+0.7
3,299,130	-		PFLU_RS14745	0.68	-0.3
3,299,130	-		PFLU_RS14745	0.68	-0.2
3,299,160	-		PFLU_RS14745	0.70	+0.9
3,299,288	+		PFLU_RS14745	0.78	-0.7
3,299,288	+		PFLU_RS14745	0.78	-1.2
3,299,289	-		PFLU_RS14745	0.78	-0.2
3,299,289	-		PFLU_RS14745	0.78	+0.8
3,299,289	-		PFLU_RS14745	0.78	-1.1
3,299,289	-		PFLU_RS14745	0.78	-0.6
3,299,289	-		PFLU_RS14745	0.78	-1.5
3,299,289	-		PFLU_RS14745	0.78	-0.1
3,299,289	-		PFLU_RS14745	0.78	-0.6
3,299,349	+		PFLU_RS14745	0.82	-0.7
3,299,349	+		PFLU_RS14745	0.82	-1.4
3,299,349	+		PFLU_RS14745	0.82	+1.2
3,299,349	+		PFLU_RS14745	0.82	+0.8
3,299,349	+		PFLU_RS14745	0.82	-1.9
3,299,349	+		PFLU_RS14745	0.82	-0.7
3,299,349	+		PFLU_RS14745	0.82	+0.5
3,299,350	-		PFLU_RS14745	0.82	-0.1
3,299,350	-		PFLU_RS14745	0.82	-0.7
3,299,350	-		PFLU_RS14745	0.82	-0.7
3,299,350	-		PFLU_RS14745	0.82	-1.7
3,299,350	-		PFLU_RS14745	0.82	-0.7
3,299,350	-		PFLU_RS14745	0.82	-0.7
3,299,350	-		PFLU_RS14745	0.82	-0.1
3,299,429	+		PFLU_RS14745	0.87	-1.3
3,299,429	+		PFLU_RS14745	0.87	-0.1
3,299,429	+		PFLU_RS14745	0.87	-0.4
3,299,429	+		PFLU_RS14745	0.87	-0.1
3,299,429	+		PFLU_RS14745	0.87	-0.7
3,299,429	+		PFLU_RS14745	0.87	-0.3
3,299,429	+		PFLU_RS14745	0.87	-2.3
3,299,430	-		PFLU_RS14745	0.88	+2.2
3,299,430	-		PFLU_RS14745	0.88	+0.1
3,299,430	-		PFLU_RS14745	0.88	-1.1
3,299,430	-		PFLU_RS14745	0.88	+0.1
3,299,430	-		PFLU_RS14745	0.88	-0.5
3,299,430	-		PFLU_RS14745	0.88	+1.1
3,299,430	-		PFLU_RS14745	0.88	+3.5
3,299,430	-		PFLU_RS14745	0.88	-1.4
3,299,593	+				+0.3
3,299,610	+				+2.1
3,299,610	+				+0.9
3,299,610	+				-0.5
3,299,610	+				-3.1
3,299,610	+				-0.2
3,299,611	-				+1.6
3,299,611	-				-1.3
3,299,611	-				-2.8
3,299,636	+				+0.9
3,299,636	+				+0.2
3,299,636	+				+2.2
3,299,636	+				-0.8
3,299,636	+				-0.1
3,299,636	+				-2.1
3,299,636	+				-0.3
3,299,636	+				-0.5
3,299,636	+				-0.7
3,299,637	-				-0.2
3,299,637	-				+0.9
3,299,637	-				-0.4
3,299,637	-				+1.9
3,299,637	-				+0.9
3,299,637	-				+0.9
3,299,637	-				-0.7
3,299,637	-				+0.2
3,299,637	-				+0.6
3,299,642	+				+0.9
3,299,643	-				-0.1
3,299,643	-				-0.7
3,299,673	-				+0.3
3,299,687	-				-1.7
3,299,762	+				-0.7
3,299,762	+				+1.3
3,299,762	+				-0.1
3,299,762	+				-1.9
3,299,762	+				-0.1
3,299,762	+				-2.0
3,299,763	-				-0.8
3,299,763	-				-0.5
3,299,763	-				-0.1
3,299,763	-				+0.3
3,299,763	-				-2.1
3,299,763	-				+1.7
3,299,763	-				-0.1
3,299,764	+				-2.1
3,299,764	+				-0.8
3,299,764	+				-0.7
3,299,764	+				-1.1
3,299,764	+				-0.8
3,299,765	-				-0.0
3,299,765	-				-1.7
3,299,765	-				-1.7
3,299,765	-				-0.8
3,299,765	-				-1.9
3,299,765	-				-0.7
3,299,765	-				-1.1
3,299,858	+				-2.0
3,299,859	-				-1.5
3,299,981	+		PFLU_RS14750	0.21	+1.5
3,300,036	-		PFLU_RS14750	0.26	-2.8
3,300,086	+		PFLU_RS14750	0.31	-1.4
3,300,086	+		PFLU_RS14750	0.31	-1.1
3,300,087	-		PFLU_RS14750	0.31	-3.8
3,300,087	-		PFLU_RS14750	0.31	-1.7
3,300,263	+		PFLU_RS14750	0.47	-2.5
3,300,263	+		PFLU_RS14750	0.47	-2.3
3,300,263	+		PFLU_RS14750	0.47	+0.1
3,300,263	+		PFLU_RS14750	0.47	-2.1
3,300,263	+		PFLU_RS14750	0.47	-1.6
3,300,359	+		PFLU_RS14750	0.56	-1.1
3,300,359	+		PFLU_RS14750	0.56	+0.3
3,300,359	+		PFLU_RS14750	0.56	-1.9
3,300,360	-		PFLU_RS14750	0.57	-0.4
3,300,415	+		PFLU_RS14750	0.62	-1.0
3,300,415	+		PFLU_RS14750	0.62	+0.9
3,300,416	-		PFLU_RS14750	0.62	-1.9
3,300,416	-		PFLU_RS14750	0.62	+0.0
3,300,489	+		PFLU_RS14750	0.69	+1.9
3,300,489	+		PFLU_RS14750	0.69	-1.4
3,300,489	+		PFLU_RS14750	0.69	-0.9
3,300,489	+		PFLU_RS14750	0.69	-1.9
3,300,489	+		PFLU_RS14750	0.69	-0.8
3,300,489	+		PFLU_RS14750	0.69	-0.1
3,300,490	-		PFLU_RS14750	0.69	-1.3
3,300,490	-		PFLU_RS14750	0.69	-0.7
3,300,490	-		PFLU_RS14750	0.69	-0.5
3,300,490	-		PFLU_RS14750	0.69	-1.1
3,300,490	-		PFLU_RS14750	0.69	-1.5
3,300,490	-		PFLU_RS14750	0.69	-2.7
3,300,490	-		PFLU_RS14750	0.69	-2.9
3,300,490	-		PFLU_RS14750	0.69	-0.8
3,300,490	-		PFLU_RS14750	0.69	-0.8
3,300,511	+		PFLU_RS14750	0.71	+2.9
3,300,511	+		PFLU_RS14750	0.71	+0.0
3,300,573	-		PFLU_RS14750	0.77	-1.7
3,300,573	-		PFLU_RS14750	0.77	-1.3
3,300,573	-		PFLU_RS14750	0.77	-2.5
3,300,631	+		PFLU_RS14750	0.82	-0.7
3,300,632	-		PFLU_RS14750	0.82	-1.2
3,300,641	+		PFLU_RS14750	0.83	-1.5
3,300,641	+		PFLU_RS14750	0.83	+1.3
3,300,641	+		PFLU_RS14750	0.83	-1.2
3,300,641	+		PFLU_RS14750	0.83	+0.0
3,300,641	+		PFLU_RS14750	0.83	-2.5
3,300,641	+		PFLU_RS14750	0.83	-1.3
3,300,642	-		PFLU_RS14750	0.83	-1.9
3,300,642	-		PFLU_RS14750	0.83	-1.4
3,300,642	-		PFLU_RS14750	0.83	-2.9
3,300,642	-		PFLU_RS14750	0.83	-1.7
3,300,642	-		PFLU_RS14750	0.83	-3.2
3,300,642	-		PFLU_RS14750	0.83	-1.9
3,300,642	-		PFLU_RS14750	0.83	-2.3
3,300,698	+		PFLU_RS14750	0.88	-1.3
3,300,749	+				-0.1
3,300,749	+				-2.7
3,300,749	+				-3.0
3,300,749	+				-0.7
3,300,749	+				-0.7
3,300,749	+				-1.4
3,300,749	+				-0.2
3,300,749	+				-0.4
3,300,750	-				-2.7
3,300,750	-				-2.7
3,300,750	-				-0.9
3,300,750	-				-2.4
3,300,750	-				-1.5
3,300,750	-				-2.4
3,300,795	+				-2.1
3,300,795	+				+0.9
3,300,795	+				-0.1
3,300,795	+				-1.1
3,300,795	+				-3.2
3,300,795	+				-1.7
3,300,795	+				-1.9
3,300,795	+				-2.5
3,300,796	-				-0.3
3,300,796	-				-1.0
3,300,796	-				-0.1
3,300,796	-				-0.5
3,300,796	-				-1.9
3,300,796	-				-0.3
3,300,837	-				-0.2
3,300,837	-				+1.5
3,300,837	-				-0.6
3,300,845	+				-1.3
3,300,845	+				-2.0
3,300,845	+				-1.7
3,300,845	+				-0.0
3,300,845	+				-1.4
3,300,845	+				+0.3
3,300,846	-				-0.5
3,300,846	-				-0.8
3,300,846	-				-1.8
3,300,848	+				-1.0
3,300,849	-				-0.1
3,300,849	-				-2.1
3,300,849	-				-0.7
3,300,849	-				-2.3
3,300,849	-				+1.4
3,300,849	-				+0.0
3,300,849	-				+0.9
3,300,909	+				-1.3
3,300,909	+				+1.5
3,300,909	+				+1.6
3,300,909	+				+0.3
3,300,910	-				-0.9
3,300,910	-				+0.5
3,300,910	-				+0.1
3,300,910	-				-0.7
3,300,910	-				-1.1
3,300,910	-				-0.7
3,300,962	+				-2.2
3,300,963	-				+2.7
3,301,071	+		PFLU_RS14755	0.20	-1.0
3,301,072	-		PFLU_RS14755	0.20	+0.9
3,301,072	-		PFLU_RS14755	0.20	-0.4
3,301,072	-		PFLU_RS14755	0.20	-0.1
3,301,152	+		PFLU_RS14755	0.29	+1.2
3,301,152	+		PFLU_RS14755	0.29	-0.4
3,301,152	+		PFLU_RS14755	0.29	+0.6
3,301,152	+		PFLU_RS14755	0.29	-1.3
3,301,152	+		PFLU_RS14755	0.29	-0.1
3,301,152	+		PFLU_RS14755	0.29	-0.7
3,301,152	+		PFLU_RS14755	0.29	-0.1
3,301,152	+		PFLU_RS14755	0.29	+0.6
3,301,152	+		PFLU_RS14755	0.29	-0.9
3,301,152	+		PFLU_RS14755	0.29	+0.5
3,301,153	-		PFLU_RS14755	0.29	-0.7
3,301,153	-		PFLU_RS14755	0.29	-0.2
3,301,153	-		PFLU_RS14755	0.29	+1.1
3,301,153	-		PFLU_RS14755	0.29	+0.9
3,301,153	-		PFLU_RS14755	0.29	-0.3
3,301,153	-		PFLU_RS14755	0.29	-2.3
3,301,153	-		PFLU_RS14755	0.29	+1.1
3,301,153	-		PFLU_RS14755	0.29	-0.7
3,301,179	+		PFLU_RS14755	0.32	-1.9
3,301,179	+		PFLU_RS14755	0.32	-0.7
3,301,180	-		PFLU_RS14755	0.32	+0.6
3,301,180	-		PFLU_RS14755	0.32	+1.1
3,301,382	+		PFLU_RS14755	0.54	+0.5
3,301,563	+		PFLU_RS14755	0.75	+2.5
3,301,563	+		PFLU_RS14755	0.75	+1.0
3,301,563	+		PFLU_RS14755	0.75	-0.9
3,301,563	+		PFLU_RS14755	0.75	-0.2
3,301,563	+		PFLU_RS14755	0.75	-0.1
3,301,564	-		PFLU_RS14755	0.75	+1.2
3,301,564	-		PFLU_RS14755	0.75	-0.8
3,301,564	-		PFLU_RS14755	0.75	-0.7
3,301,647	+		PFLU_RS14755	0.84	+0.7
3,301,647	+		PFLU_RS14755	0.84	-2.1
3,301,648	-		PFLU_RS14755	0.84	-1.4
3,301,648	-		PFLU_RS14755	0.84	-0.1
3,301,784	+				+0.9
3,301,784	+				+1.8
3,301,785	-				-0.9
3,301,785	-				+0.2
3,301,785	-				-1.0