Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_772 and PfGW456L13_773 are separated by 9 nucleotides PfGW456L13_773 and PfGW456L13_774 are separated by 283 nucleotides
PfGW456L13_772 - ATP-dependent DNA helicase RecG (EC 3.6.1.-), at 875,951 to 878,026
_772
PfGW456L13_773 - Hydrogen peroxide-inducible genes activator, at 878,036 to 878,965
_773
PfGW456L13_774 - Ferric siderophore transport system, periplasmic binding protein TonB, at 879,249 to 879,950
_774
Position (kb) 878
879 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 877.246 kb on - strand, within PfGW456L13_772 at 877.264 kb on + strand, within PfGW456L13_772 at 877.429 kb on - strand, within PfGW456L13_772 at 877.462 kb on - strand, within PfGW456L13_772 at 877.579 kb on - strand, within PfGW456L13_772 at 877.647 kb on + strand, within PfGW456L13_772 at 877.647 kb on + strand, within PfGW456L13_772 at 877.647 kb on + strand, within PfGW456L13_772 at 877.647 kb on + strand, within PfGW456L13_772 at 877.743 kb on + strand, within PfGW456L13_772 at 877.743 kb on + strand, within PfGW456L13_772 at 877.743 kb on + strand, within PfGW456L13_772 at 877.744 kb on - strand, within PfGW456L13_772 at 877.744 kb on - strand, within PfGW456L13_772 at 877.787 kb on + strand, within PfGW456L13_772 at 877.787 kb on + strand, within PfGW456L13_772 at 877.788 kb on - strand, within PfGW456L13_772 at 877.788 kb on - strand, within PfGW456L13_772 at 878.469 kb on + strand, within PfGW456L13_773 at 878.469 kb on + strand, within PfGW456L13_773 at 878.469 kb on + strand, within PfGW456L13_773 at 878.470 kb on - strand, within PfGW456L13_773 at 878.470 kb on - strand, within PfGW456L13_773 at 878.470 kb on - strand, within PfGW456L13_773 at 878.485 kb on - strand, within PfGW456L13_773 at 878.598 kb on + strand, within PfGW456L13_773 at 878.598 kb on + strand, within PfGW456L13_773 at 878.598 kb on + strand, within PfGW456L13_773 at 878.599 kb on - strand, within PfGW456L13_773 at 878.599 kb on - strand, within PfGW456L13_773 at 878.599 kb on - strand, within PfGW456L13_773 at 878.599 kb on - strand, within PfGW456L13_773 at 878.599 kb on - strand, within PfGW456L13_773 at 878.656 kb on - strand, within PfGW456L13_773 at 878.656 kb on - strand, within PfGW456L13_773 at 878.670 kb on + strand, within PfGW456L13_773 at 878.670 kb on + strand, within PfGW456L13_773 at 878.670 kb on + strand, within PfGW456L13_773 at 878.670 kb on + strand, within PfGW456L13_773 at 878.754 kb on - strand, within PfGW456L13_773 at 878.943 kb on + strand at 878.943 kb on + strand at 878.944 kb on - strand at 878.944 kb on - strand at 878.944 kb on - strand at 878.944 kb on - strand at 878.944 kb on - strand at 878.944 kb on - strand at 878.944 kb on - strand at 878.944 kb on - strand at 878.948 kb on + strand at 878.948 kb on + strand at 878.948 kb on + strand at 878.949 kb on - strand at 878.949 kb on - strand at 878.949 kb on - strand at 878.949 kb on - strand at 878.965 kb on + strand at 878.965 kb on + strand at 878.965 kb on + strand at 878.965 kb on + strand at 878.965 kb on + strand at 878.965 kb on + strand at 878.965 kb on + strand at 878.965 kb on + strand at 878.966 kb on - strand at 878.966 kb on - strand at 878.980 kb on + strand at 878.980 kb on + strand at 878.980 kb on + strand at 878.980 kb on + strand at 878.980 kb on + strand at 878.980 kb on + strand at 878.980 kb on + strand at 878.980 kb on + strand at 878.980 kb on + strand at 878.980 kb on + strand at 878.981 kb on - strand at 878.981 kb on - strand at 878.981 kb on - strand at 878.981 kb on - strand at 879.080 kb on - strand at 879.203 kb on - strand at 879.203 kb on - strand at 879.242 kb on + strand at 879.243 kb on - strand at 879.243 kb on - strand at 879.243 kb on - strand at 879.243 kb on - strand at 879.250 kb on + strand at 879.251 kb on - strand at 879.251 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 877,246 - PfGW456L13_772 0.62 -2.5 877,264 + PfGW456L13_772 0.63 -2.9 877,429 - PfGW456L13_772 0.71 -2.3 877,462 - PfGW456L13_772 0.73 +0.9 877,579 - PfGW456L13_772 0.78 -0.1 877,647 + PfGW456L13_772 0.82 -0.7 877,647 + PfGW456L13_772 0.82 -0.5 877,647 + PfGW456L13_772 0.82 -1.5 877,647 + PfGW456L13_772 0.82 +0.1 877,743 + PfGW456L13_772 0.86 -0.2 877,743 + PfGW456L13_772 0.86 -0.7 877,743 + PfGW456L13_772 0.86 -0.1 877,744 - PfGW456L13_772 0.86 +1.1 877,744 - PfGW456L13_772 0.86 +0.7 877,787 + PfGW456L13_772 0.88 -1.5 877,787 + PfGW456L13_772 0.88 -2.5 877,788 - PfGW456L13_772 0.88 -0.2 877,788 - PfGW456L13_772 0.88 +0.2 878,469 + PfGW456L13_773 0.47 +2.5 878,469 + PfGW456L13_773 0.47 -0.1 878,469 + PfGW456L13_773 0.47 +0.9 878,470 - PfGW456L13_773 0.47 -1.1 878,470 - PfGW456L13_773 0.47 -0.4 878,470 - PfGW456L13_773 0.47 +1.1 878,485 - PfGW456L13_773 0.48 +0.5 878,598 + PfGW456L13_773 0.60 -0.7 878,598 + PfGW456L13_773 0.60 -0.1 878,598 + PfGW456L13_773 0.60 -1.1 878,599 - PfGW456L13_773 0.61 -1.2 878,599 - PfGW456L13_773 0.61 -3.2 878,599 - PfGW456L13_773 0.61 -1.7 878,599 - PfGW456L13_773 0.61 +0.6 878,599 - PfGW456L13_773 0.61 +3.7 878,656 - PfGW456L13_773 0.67 -0.5 878,656 - PfGW456L13_773 0.67 -1.5 878,670 + PfGW456L13_773 0.68 -1.0 878,670 + PfGW456L13_773 0.68 +0.9 878,670 + PfGW456L13_773 0.68 -0.1 878,670 + PfGW456L13_773 0.68 -0.7 878,754 - PfGW456L13_773 0.77 +0.5 878,943 + +1.9 878,943 + -0.1 878,944 - -0.7 878,944 - +0.9 878,944 - -1.2 878,944 - -1.4 878,944 - -0.1 878,944 - -1.5 878,944 - +0.9 878,944 - +0.5 878,948 + -1.1 878,948 + -0.7 878,948 + +0.9 878,949 - -0.1 878,949 - -0.5 878,949 - -0.4 878,949 - -0.4 878,965 + -0.1 878,965 + -1.1 878,965 + -0.7 878,965 + -2.8 878,965 + +0.9 878,965 + +0.1 878,965 + -1.4 878,965 + +1.5 878,966 - -0.1 878,966 - -0.7 878,980 + -0.6 878,980 + -1.7 878,980 + -2.1 878,980 + +0.1 878,980 + +3.2 878,980 + +0.4 878,980 + -1.1 878,980 + -0.1 878,980 + -1.1 878,980 + -1.0 878,981 - -0.0 878,981 - -0.7 878,981 - -1.5 878,981 - -1.0 879,080 - +0.5 879,203 - -0.2 879,203 - -0.7 879,242 + +0.9 879,243 - +0.1 879,243 - +0.1 879,243 - -1.7 879,243 - -0.8 879,250 + -0.7 879,251 - -0.7 879,251 - -0.4
Or see this region's nucleotide sequence