Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4494 and PfGW456L13_4495 are separated by 119 nucleotides PfGW456L13_4495 and PfGW456L13_4496 are separated by 41 nucleotides
PfGW456L13_4494 - D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95), at 5,020,629 to 5,021,561
_4494
PfGW456L13_4495 - Protein YcgL, at 5,021,681 to 5,021,929
_4495
PfGW456L13_4496 - Ribonuclease D (EC 3.1.26.3), at 5,021,971 to 5,023,104
_4496
Position (kb)
5021
5022 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 5020.681 kb on + strand at 5020.681 kb on + strand at 5020.682 kb on - strand at 5020.682 kb on - strand at 5020.682 kb on - strand at 5020.990 kb on + strand, within PfGW456L13_4494 at 5020.990 kb on + strand, within PfGW456L13_4494 at 5020.990 kb on + strand, within PfGW456L13_4494 at 5020.991 kb on - strand, within PfGW456L13_4494 at 5021.080 kb on + strand, within PfGW456L13_4494 at 5021.080 kb on + strand, within PfGW456L13_4494 at 5021.080 kb on + strand, within PfGW456L13_4494 at 5021.080 kb on + strand, within PfGW456L13_4494 at 5021.080 kb on + strand, within PfGW456L13_4494 at 5021.080 kb on + strand, within PfGW456L13_4494 at 5021.081 kb on - strand, within PfGW456L13_4494 at 5021.081 kb on - strand, within PfGW456L13_4494 at 5021.081 kb on - strand, within PfGW456L13_4494 at 5021.081 kb on - strand, within PfGW456L13_4494 at 5021.251 kb on + strand, within PfGW456L13_4494 at 5021.251 kb on + strand, within PfGW456L13_4494 at 5021.251 kb on + strand, within PfGW456L13_4494 at 5021.251 kb on + strand, within PfGW456L13_4494 at 5021.251 kb on + strand, within PfGW456L13_4494 at 5021.252 kb on - strand, within PfGW456L13_4494 at 5021.252 kb on - strand, within PfGW456L13_4494 at 5021.252 kb on - strand, within PfGW456L13_4494 at 5021.252 kb on - strand, within PfGW456L13_4494 at 5021.252 kb on - strand, within PfGW456L13_4494 at 5021.252 kb on - strand, within PfGW456L13_4494 at 5021.252 kb on - strand at 5021.252 kb on - strand, within PfGW456L13_4494 at 5021.252 kb on - strand, within PfGW456L13_4494 at 5021.263 kb on + strand, within PfGW456L13_4494 at 5021.394 kb on + strand, within PfGW456L13_4494 at 5021.395 kb on - strand, within PfGW456L13_4494 at 5021.524 kb on + strand at 5021.730 kb on + strand, within PfGW456L13_4495 at 5021.730 kb on + strand, within PfGW456L13_4495 at 5021.730 kb on + strand, within PfGW456L13_4495 at 5021.730 kb on + strand, within PfGW456L13_4495 at 5021.730 kb on + strand, within PfGW456L13_4495 at 5021.731 kb on - strand, within PfGW456L13_4495 at 5021.731 kb on - strand, within PfGW456L13_4495 at 5021.731 kb on - strand, within PfGW456L13_4495 at 5021.764 kb on - strand, within PfGW456L13_4495 at 5021.919 kb on + strand at 5021.919 kb on + strand at 5021.919 kb on + strand at 5021.919 kb on + strand at 5021.919 kb on + strand at 5021.919 kb on + strand at 5021.919 kb on + strand at 5021.919 kb on + strand at 5021.919 kb on + strand at 5021.919 kb on + strand at 5021.919 kb on + strand at 5021.919 kb on + strand at 5021.920 kb on - strand at 5021.920 kb on - strand at 5021.920 kb on - strand at 5021.920 kb on - strand at 5021.920 kb on - strand at 5021.920 kb on - strand at 5021.920 kb on - strand at 5021.925 kb on + strand at 5021.925 kb on + strand at 5021.925 kb on + strand at 5021.925 kb on + strand at 5021.926 kb on - strand at 5021.926 kb on - strand at 5021.926 kb on - strand at 5021.952 kb on + strand at 5021.965 kb on + strand at 5021.965 kb on + strand at 5021.965 kb on + strand at 5021.966 kb on - strand at 5021.966 kb on - strand at 5022.164 kb on - strand, within PfGW456L13_4496 at 5022.300 kb on + strand, within PfGW456L13_4496 at 5022.300 kb on + strand, within PfGW456L13_4496 at 5022.301 kb on - strand, within PfGW456L13_4496 at 5022.301 kb on - strand, within PfGW456L13_4496 at 5022.301 kb on - strand, within PfGW456L13_4496 at 5022.301 kb on - strand, within PfGW456L13_4496 at 5022.503 kb on + strand, within PfGW456L13_4496 at 5022.504 kb on - strand, within PfGW456L13_4496 at 5022.512 kb on + strand, within PfGW456L13_4496 at 5022.575 kb on + strand, within PfGW456L13_4496 at 5022.575 kb on + strand, within PfGW456L13_4496 at 5022.575 kb on + strand, within PfGW456L13_4496 at 5022.576 kb on - strand, within PfGW456L13_4496 at 5022.608 kb on - strand, within PfGW456L13_4496 at 5022.647 kb on + strand, within PfGW456L13_4496 at 5022.647 kb on + strand, within PfGW456L13_4496 at 5022.647 kb on + strand, within PfGW456L13_4496 at 5022.647 kb on + strand, within PfGW456L13_4496 at 5022.648 kb on - strand, within PfGW456L13_4496 at 5022.648 kb on - strand, within PfGW456L13_4496 at 5022.648 kb on - strand, within PfGW456L13_4496 at 5022.648 kb on - strand, within PfGW456L13_4496 at 5022.830 kb on - strand, within PfGW456L13_4496
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 5,020,681 + -0.7 5,020,681 + +0.1 5,020,682 - -0.1 5,020,682 - +0.9 5,020,682 - -0.4 5,020,990 + PfGW456L13_4494 0.39 -0.8 5,020,990 + PfGW456L13_4494 0.39 +0.9 5,020,990 + PfGW456L13_4494 0.39 +1.0 5,020,991 - PfGW456L13_4494 0.39 +0.2 5,021,080 + PfGW456L13_4494 0.48 -1.7 5,021,080 + PfGW456L13_4494 0.48 +1.4 5,021,080 + PfGW456L13_4494 0.48 -0.0 5,021,080 + PfGW456L13_4494 0.48 -0.4 5,021,080 + PfGW456L13_4494 0.48 +0.7 5,021,080 + PfGW456L13_4494 0.48 -0.4 5,021,081 - PfGW456L13_4494 0.48 +0.2 5,021,081 - PfGW456L13_4494 0.48 +0.6 5,021,081 - PfGW456L13_4494 0.48 +0.1 5,021,081 - PfGW456L13_4494 0.48 -0.1 5,021,251 + PfGW456L13_4494 0.67 -1.6 5,021,251 + PfGW456L13_4494 0.67 +0.5 5,021,251 + PfGW456L13_4494 0.67 +0.4 5,021,251 + PfGW456L13_4494 0.67 +0.8 5,021,251 + PfGW456L13_4494 0.67 +2.8 5,021,252 - PfGW456L13_4494 0.67 -1.0 5,021,252 - PfGW456L13_4494 0.67 -0.3 5,021,252 - PfGW456L13_4494 0.67 -0.0 5,021,252 - PfGW456L13_4494 0.67 -0.6 5,021,252 - PfGW456L13_4494 0.67 -0.2 5,021,252 - PfGW456L13_4494 0.67 +0.8 5,021,252 - +1.6 5,021,252 - PfGW456L13_4494 0.67 +0.4 5,021,252 - PfGW456L13_4494 0.67 +0.2 5,021,263 + PfGW456L13_4494 0.68 +1.7 5,021,394 + PfGW456L13_4494 0.82 -0.6 5,021,395 - PfGW456L13_4494 0.82 -0.7 5,021,524 + -1.4 5,021,730 + PfGW456L13_4495 0.20 -1.2 5,021,730 + PfGW456L13_4495 0.20 -0.5 5,021,730 + PfGW456L13_4495 0.20 -1.8 5,021,730 + PfGW456L13_4495 0.20 -2.9 5,021,730 + PfGW456L13_4495 0.20 -0.6 5,021,731 - PfGW456L13_4495 0.20 +0.4 5,021,731 - PfGW456L13_4495 0.20 +0.0 5,021,731 - PfGW456L13_4495 0.20 -0.8 5,021,764 - PfGW456L13_4495 0.33 +2.0 5,021,919 + -0.8 5,021,919 + +0.9 5,021,919 + -0.6 5,021,919 + -1.1 5,021,919 + -0.1 5,021,919 + +0.0 5,021,919 + -0.9 5,021,919 + -0.2 5,021,919 + +1.4 5,021,919 + -1.2 5,021,919 + -1.6 5,021,919 + -0.7 5,021,920 - -0.1 5,021,920 - +1.4 5,021,920 - -1.0 5,021,920 - +0.4 5,021,920 - -0.8 5,021,920 - -0.8 5,021,920 - +0.5 5,021,925 + -0.4 5,021,925 + -1.4 5,021,925 + +1.3 5,021,925 + -0.5 5,021,926 - -0.7 5,021,926 - -0.1 5,021,926 - +1.4 5,021,952 + -1.4 5,021,965 + +1.0 5,021,965 + -0.3 5,021,965 + +0.7 5,021,966 - -0.9 5,021,966 - +1.8 5,022,164 - PfGW456L13_4496 0.17 -0.6 5,022,300 + PfGW456L13_4496 0.29 +2.0 5,022,300 + PfGW456L13_4496 0.29 +0.1 5,022,301 - PfGW456L13_4496 0.29 +0.0 5,022,301 - PfGW456L13_4496 0.29 -1.9 5,022,301 - PfGW456L13_4496 0.29 +1.0 5,022,301 - PfGW456L13_4496 0.29 -0.1 5,022,503 + PfGW456L13_4496 0.47 -1.7 5,022,504 - PfGW456L13_4496 0.47 +1.0 5,022,512 + PfGW456L13_4496 0.48 +2.4 5,022,575 + PfGW456L13_4496 0.53 -1.1 5,022,575 + PfGW456L13_4496 0.53 -0.0 5,022,575 + PfGW456L13_4496 0.53 +0.9 5,022,576 - PfGW456L13_4496 0.53 +0.4 5,022,608 - PfGW456L13_4496 0.56 +1.0 5,022,647 + PfGW456L13_4496 0.60 -0.4 5,022,647 + PfGW456L13_4496 0.60 +0.0 5,022,647 + PfGW456L13_4496 0.60 +0.3 5,022,647 + PfGW456L13_4496 0.60 -0.6 5,022,648 - PfGW456L13_4496 0.60 -0.1 5,022,648 - PfGW456L13_4496 0.60 +0.1 5,022,648 - PfGW456L13_4496 0.60 +0.5 5,022,648 - PfGW456L13_4496 0.60 +0.0 5,022,830 - PfGW456L13_4496 0.76 +0.0
Or see this region's nucleotide sequence