Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_959
Experiment: pyrophosphate 0.0025 M
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | pyrophosphate 0.0025 M |
---|---|---|---|---|---|
remove | |||||
1,129,082 | + | -0.9 | |||
1,129,215 | + | +0.1 | |||
1,129,797 | + | -0.8 | |||
1,130,031 | - | -0.9 | |||
1,130,031 | - | +0.3 | |||
1,130,137 | - | Pf6N2E2_959 | 0.15 | -2.2 | |
1,130,337 | + | Pf6N2E2_959 | 0.42 | -0.5 | |
1,130,530 | - | Pf6N2E2_959 | 0.68 | -1.5 | |
1,130,582 | - | Pf6N2E2_959 | 0.76 | -1.5 | |
1,130,582 | - | Pf6N2E2_959 | 0.76 | -0.7 | |
1,130,615 | + | Pf6N2E2_959 | 0.80 | -1.5 | |
1,130,615 | + | Pf6N2E2_959 | 0.80 | -0.6 | |
1,130,811 | + | -0.1 | |||
1,130,873 | + | +1.7 | |||
1,130,873 | + | +0.6 | |||
1,131,275 | + | Pf6N2E2_960 | 0.20 | -0.2 | |
1,131,309 | + | Pf6N2E2_960 | 0.22 | -1.1 | |
1,131,309 | + | Pf6N2E2_960 | 0.22 | +0.0 | |
1,131,343 | + | Pf6N2E2_960 | 0.24 | +0.7 | |
1,131,344 | - | Pf6N2E2_960 | 0.24 | +0.5 | |
1,131,503 | - | Pf6N2E2_960 | 0.31 | +0.9 | |
1,131,503 | - | Pf6N2E2_960 | 0.31 | +2.7 | |
1,131,596 | - | Pf6N2E2_960 | 0.35 | +0.6 | |
1,131,665 | - | Pf6N2E2_960 | 0.39 | -0.7 | |
1,131,678 | + | Pf6N2E2_960 | 0.39 | +0.3 | |
1,131,679 | - | Pf6N2E2_960 | 0.39 | -0.7 | |
1,131,748 | + | Pf6N2E2_960 | 0.43 | +0.0 | |
1,131,748 | + | Pf6N2E2_960 | 0.43 | -0.9 | |
1,131,748 | + | Pf6N2E2_960 | 0.43 | -0.7 | |
1,131,752 | + | Pf6N2E2_960 | 0.43 | +0.6 | |
1,131,752 | + | Pf6N2E2_960 | 0.43 | +0.5 |
Or see this region's nucleotide sequence