Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09160 and BWI76_RS09165 are separated by 47 nucleotides BWI76_RS09165 and BWI76_RS09170 overlap by 1 nucleotides BWI76_RS09170 and BWI76_RS09175 are separated by 149 nucleotides BWI76_RS09175 and BWI76_RS09180 are separated by 157 nucleotides
BWI76_RS09160: BWI76_RS09160 - multidrug transporter MdfA, at 1,934,987 to 1,936,222
_RS09160
BWI76_RS09165: BWI76_RS09165 - phosphatase YbjI, at 1,936,270 to 1,937,085
_RS09165
BWI76_RS09170: BWI76_RS09170 - MFS transporter, at 1,937,085 to 1,938,287
_RS09170
BWI76_RS09175: BWI76_RS09175 - DNA-binding transcriptional regulator, at 1,938,437 to 1,938,979
_RS09175
BWI76_RS09180: BWI76_RS09180 - hypothetical protein, at 1,939,137 to 1,939,406
_RS09180
Position (kb)
1937
1938
1939 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1936.299 kb on - strand at 1936.360 kb on + strand, within BWI76_RS09165 at 1936.463 kb on - strand, within BWI76_RS09165 at 1936.472 kb on + strand, within BWI76_RS09165 at 1936.479 kb on - strand, within BWI76_RS09165 at 1936.535 kb on + strand at 1936.543 kb on - strand, within BWI76_RS09165 at 1936.922 kb on - strand, within BWI76_RS09165 at 1937.081 kb on - strand at 1937.470 kb on - strand, within BWI76_RS09170 at 1937.500 kb on - strand, within BWI76_RS09170 at 1937.540 kb on + strand, within BWI76_RS09170 at 1937.792 kb on + strand, within BWI76_RS09170 at 1937.837 kb on + strand, within BWI76_RS09170 at 1937.905 kb on + strand, within BWI76_RS09170 at 1938.009 kb on - strand, within BWI76_RS09170 at 1938.096 kb on - strand, within BWI76_RS09170 at 1938.096 kb on - strand, within BWI76_RS09170 at 1938.096 kb on - strand, within BWI76_RS09170 at 1938.096 kb on - strand, within BWI76_RS09170 at 1938.411 kb on - strand at 1938.524 kb on + strand, within BWI76_RS09175 at 1938.524 kb on - strand, within BWI76_RS09175 at 1938.599 kb on - strand, within BWI76_RS09175 at 1938.615 kb on + strand, within BWI76_RS09175 at 1938.727 kb on + strand, within BWI76_RS09175 at 1938.735 kb on - strand, within BWI76_RS09175 at 1938.735 kb on - strand, within BWI76_RS09175 at 1938.752 kb on - strand, within BWI76_RS09175 at 1938.837 kb on + strand, within BWI76_RS09175 at 1938.845 kb on - strand, within BWI76_RS09175 at 1938.845 kb on - strand, within BWI76_RS09175 at 1938.953 kb on + strand at 1939.094 kb on - strand at 1939.211 kb on - strand, within BWI76_RS09180
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 1,936,299 - -0.5 1,936,360 + BWI76_RS09165 0.11 -0.7 1,936,463 - BWI76_RS09165 0.24 -1.2 1,936,472 + BWI76_RS09165 0.25 -1.9 1,936,479 - BWI76_RS09165 0.26 -0.2 1,936,535 + +2.3 1,936,543 - BWI76_RS09165 0.33 -0.1 1,936,922 - BWI76_RS09165 0.80 +0.7 1,937,081 - +0.5 1,937,470 - BWI76_RS09170 0.32 +1.5 1,937,500 - BWI76_RS09170 0.34 +0.2 1,937,540 + BWI76_RS09170 0.38 +0.2 1,937,792 + BWI76_RS09170 0.59 +1.9 1,937,837 + BWI76_RS09170 0.63 +0.3 1,937,905 + BWI76_RS09170 0.68 +0.7 1,938,009 - BWI76_RS09170 0.77 +0.0 1,938,096 - BWI76_RS09170 0.84 +0.7 1,938,096 - BWI76_RS09170 0.84 +0.2 1,938,096 - BWI76_RS09170 0.84 +0.2 1,938,096 - BWI76_RS09170 0.84 -0.5 1,938,411 - -0.1 1,938,524 + BWI76_RS09175 0.16 -0.6 1,938,524 - BWI76_RS09175 0.16 -0.1 1,938,599 - BWI76_RS09175 0.30 +0.4 1,938,615 + BWI76_RS09175 0.33 -0.4 1,938,727 + BWI76_RS09175 0.53 +0.4 1,938,735 - BWI76_RS09175 0.55 +0.3 1,938,735 - BWI76_RS09175 0.55 +0.7 1,938,752 - BWI76_RS09175 0.58 -0.1 1,938,837 + BWI76_RS09175 0.74 +0.1 1,938,845 - BWI76_RS09175 0.75 +0.4 1,938,845 - BWI76_RS09175 0.75 +0.4 1,938,953 + -1.3 1,939,094 - -0.8 1,939,211 - BWI76_RS09180 0.27 -0.0
Or see this region's nucleotide sequence