Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18660

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
4,104,756	+				+0.3
4,104,757	-				-2.9
4,104,757	-				-0.2
4,104,799	-				-1.1
4,104,824	+				+1.6
4,104,824	+				+0.4
4,104,824	+				+1.5
4,104,824	+				-0.5
4,104,824	+				+3.3
4,104,824	+				-0.5
4,104,825	-				-2.2
4,104,825	-				-0.4
4,104,847	+				+1.2
4,104,847	+				-0.9
4,104,847	+				+2.5
4,104,848	-				-1.4
4,104,848	-				-0.2
4,104,848	-				+0.2
4,104,848	-				-1.9
4,104,848	-				-1.5
4,104,848	-				-2.1
4,104,848	-				+1.3
4,104,855	-				-2.0
4,104,855	-				-0.5
4,104,855	-				+2.2
4,104,861	+				-0.2
4,104,862	-				-1.4
4,104,868	+				+0.2
4,104,868	+				-1.2
4,104,868	+				-2.2
4,104,868	+				-2.0
4,104,869	-				-1.1
4,104,869	-				-1.4
4,104,869	-				-1.5
4,104,903	-				-1.5
4,104,930	+		AO353_18650	0.14	-1.5
4,104,930	+		AO353_18650	0.14	-2.1
4,104,930	+		AO353_18650	0.14	-3.2
4,104,930	+		AO353_18650	0.14	-1.6
4,104,931	-		AO353_18650	0.14	-1.8
4,104,931	-		AO353_18650	0.14	-1.2
4,104,931	-		AO353_18650	0.14	-1.6
4,104,931	-		AO353_18650	0.14	-0.2
4,104,931	-		AO353_18650	0.14	-0.4
4,105,066	+		AO353_18650	0.49	-2.3
4,105,066	+		AO353_18650	0.49	-1.6
4,105,066	+		AO353_18650	0.49	-3.0
4,105,067	-		AO353_18650	0.49	-1.6
4,105,067	-		AO353_18650	0.49	-0.5
4,105,142	+		AO353_18650	0.68	+1.3
4,105,142	+		AO353_18650	0.68	-0.2
4,105,142	+		AO353_18650	0.68	-0.2
4,105,142	+		AO353_18650	0.68	-0.5
4,105,142	+		AO353_18650	0.68	-1.2
4,105,142	+		AO353_18650	0.68	+0.2
4,105,142	+		AO353_18650	0.68	-2.1
4,105,143	-		AO353_18650	0.69	-0.6
4,105,143	-		AO353_18650	0.69	-2.2
4,105,143	-		AO353_18650	0.69	-2.7
4,105,143	-		AO353_18650	0.69	-2.5
4,105,143	-		AO353_18650	0.69	-0.9
4,105,143	-		AO353_18650	0.69	-1.5
4,105,143	-		AO353_18650	0.69	-1.7
4,105,143	-		AO353_18650	0.69	-0.4
4,105,148	+		AO353_18650	0.70	-0.5
4,105,148	+		AO353_18650	0.70	-0.9
4,105,148	+		AO353_18650	0.70	-1.5
4,105,148	+		AO353_18650	0.70	-1.9
4,105,148	+		AO353_18650	0.70	+0.8
4,105,148	+		AO353_18650	0.70	-1.1
4,105,148	+		AO353_18650	0.70	-0.2
4,105,148	+		AO353_18650	0.70	-0.9
4,105,148	+				+0.8
4,105,149	-		AO353_18650	0.70	-1.6
4,105,149	-		AO353_18650	0.70	-1.9
4,105,149	-		AO353_18650	0.70	+0.4
4,105,149	-		AO353_18650	0.70	-0.5
4,105,149	-		AO353_18650	0.70	-0.2
4,105,149	-		AO353_18650	0.70	-0.9
4,105,149	-		AO353_18650	0.70	-2.2
4,105,149	-		AO353_18650	0.70	+2.1
4,105,149	-		AO353_18650	0.70	-0.4
4,105,149	-		AO353_18650	0.70	-1.9
4,105,149	-		AO353_18650	0.70	+1.2
4,105,174	+		AO353_18650	0.77	-0.5
4,105,262	+				+2.5
4,105,263	-				+1.4
4,105,263	-				-0.8
4,105,263	-				-1.5
4,105,429	-		AO353_18655	0.47	-1.1
4,105,475	+		AO353_18655	0.63	+1.6
4,105,475	+		AO353_18655	0.63	+0.2
4,105,476	-		AO353_18655	0.63	-0.4
4,105,476	-		AO353_18655	0.63	-1.9
4,105,476	-		AO353_18655	0.63	-1.2
4,105,476	-		AO353_18655	0.63	+0.2
4,105,476	-		AO353_18655	0.63	-1.0
4,105,476	-		AO353_18655	0.63	+0.2
4,105,476	-		AO353_18655	0.63	-0.6
4,105,477	+		AO353_18655	0.63	+3.7
4,105,477	+		AO353_18655	0.63	+0.8
4,105,477	+		AO353_18655	0.63	+2.5
4,105,477	+		AO353_18655	0.63	-1.1
4,105,568	+				-0.4
4,105,594	+				+4.1
4,105,594	+				+1.2
4,105,595	-				-0.4
4,105,595	-				-1.4
4,105,644	+				+0.2
4,105,645	-				-1.8
4,105,645	-				+0.0
4,105,645	-				-0.9
4,105,645	-				-0.6
4,105,648	+				+3.0
4,105,648	+				-1.0
4,105,648	+				+4.1
4,105,649	-				-1.8
4,105,649	-				-1.4
4,105,649	-				+0.2
4,105,649	-				-1.0
4,105,649	-				-1.7
4,105,649	-				-2.2
4,105,676	+				-1.1
4,105,676	+				-1.4
4,105,677	-				-0.6
4,105,685	+				-1.3
4,105,685	+				+0.8
4,105,686	-				-1.2
4,105,704	+				-2.5
4,105,705	-				-1.4
4,105,705	-				-1.5
4,105,705	-				+2.2
4,105,717	+				-2.7
4,105,718	-				-0.5
4,105,718	-				-1.6
4,105,718	-				+0.8
4,105,718	-				-0.2
4,105,750	+				-2.6
4,105,750	+				+0.2
4,105,751	-				-0.2
4,105,751	-				-1.1
4,105,911	+		AO353_18660	0.11	-1.0
4,105,911	+		AO353_18660	0.11	-0.9
4,105,911	+		AO353_18660	0.11	-0.4
4,105,911	+		AO353_18660	0.11	-2.3
4,105,912	-		AO353_18660	0.11	-1.0
4,105,934	+		AO353_18660	0.12	-0.6
4,105,934	+		AO353_18660	0.12	-0.4
4,105,934	+		AO353_18660	0.12	-0.2
4,105,934	+		AO353_18660	0.12	-2.4
4,105,934	+		AO353_18660	0.12	+0.0
4,105,934	+		AO353_18660	0.12	-1.8
4,105,934	+		AO353_18660	0.12	-1.4
4,105,934	+		AO353_18660	0.12	-1.1
4,105,935	-		AO353_18660	0.12	-1.6
4,105,935	-		AO353_18660	0.12	-1.5
4,105,935	-		AO353_18660	0.12	-1.7
4,105,935	-		AO353_18660	0.12	-1.1
4,105,935	-		AO353_18660	0.12	-2.3
4,105,935	-		AO353_18660	0.12	-3.0
4,105,935	-		AO353_18660	0.12	-0.8
4,105,965	-		AO353_18660	0.14	-0.5
4,106,007	-		AO353_18660	0.17	+0.8
4,106,087	-		AO353_18660	0.22	-0.4
4,106,137	+		AO353_18660	0.26	-1.1
4,106,137	+		AO353_18660	0.26	-2.1
4,106,137	+		AO353_18660	0.26	-1.3
4,106,138	-		AO353_18660	0.26	-0.2
4,106,138	-		AO353_18660	0.26	-1.3
4,106,138	-		AO353_18660	0.26	-1.0
4,106,138	-		AO353_18660	0.26	-2.3
4,106,138	-		AO353_18660	0.26	-0.8
4,106,320	+		AO353_18660	0.38	-1.4
4,106,321	-		AO353_18660	0.38	-1.6
4,106,537	+		AO353_18660	0.53	-1.0
4,106,537	+		AO353_18660	0.53	-0.6
4,106,538	-		AO353_18660	0.53	+0.1
4,106,538	-		AO353_18660	0.53	-2.3
4,106,538	-		AO353_18660	0.53	-1.4
4,106,538	-		AO353_18660	0.53	+2.0
4,106,665	+		AO353_18660	0.62	-1.8
4,106,665	+		AO353_18660	0.62	+0.5
4,106,665	+		AO353_18660	0.62	-1.8
4,106,665	+		AO353_18660	0.62	-2.8
4,106,665	+		AO353_18660	0.62	-0.1
4,106,665	+		AO353_18660	0.62	-1.6
4,106,665	+		AO353_18660	0.62	-1.7
4,106,665	+		AO353_18660	0.62	-1.0
4,106,665	+		AO353_18660	0.62	-0.2
4,106,665	+		AO353_18660	0.62	-0.5
4,106,665	+		AO353_18660	0.62	-2.2
4,106,666	-		AO353_18660	0.62	-0.8
4,106,666	-		AO353_18660	0.62	-0.8
4,106,666	-		AO353_18660	0.62	-0.9
4,106,666	-		AO353_18660	0.62	-1.0
4,106,668	+		AO353_18660	0.62	-0.1
4,106,669	-		AO353_18660	0.62	+0.3
4,106,725	-		AO353_18660	0.66	-2.0
4,106,929	+		AO353_18660	0.79	-1.2
4,106,929	+		AO353_18660	0.79	-0.8
4,106,929	+		AO353_18660	0.79	-0.2
4,106,961	+		AO353_18660	0.82	+0.2
4,106,961	+		AO353_18660	0.82	-1.0
4,107,064	+		AO353_18660	0.89	-3.1
4,107,064	+		AO353_18660	0.89	+0.0
4,107,065	-		AO353_18660	0.89	-2.7
4,107,159	+				-2.0
4,107,160	-				+0.2
4,107,187	+				-1.4
4,107,187	+				-2.6
4,107,187	+				+0.4
4,107,188	-				-1.8
4,107,188	-				-0.8
4,107,288	+				-0.8
4,107,288	+				+0.2
4,107,312	-				-2.2
4,107,400	+				-2.4
4,107,400	+				-3.0
4,107,400	+				-1.0
4,107,400	+				-1.7
4,107,401	-				-0.5
4,107,477	+		AO353_18665	0.11	-3.5
4,107,477	+		AO353_18665	0.11	+0.8
4,107,477	+		AO353_18665	0.11	+1.8
4,107,477	+		AO353_18665	0.11	-2.1
4,107,477	+		AO353_18665	0.11	+2.4
4,107,477	+		AO353_18665	0.11	-1.0
4,107,477	+		AO353_18665	0.11	-1.6
4,107,478	-		AO353_18665	0.11	-2.3
4,107,478	-		AO353_18665	0.11	-0.4
4,107,478	-		AO353_18665	0.11	-1.4
4,107,478	-		AO353_18665	0.11	-1.3
4,107,478	-		AO353_18665	0.11	-1.8
4,107,834	-		AO353_18665	0.40	+0.2
4,107,834	-		AO353_18665	0.40	-1.8
4,107,960	+		AO353_18665	0.51	-1.3
4,107,960	+		AO353_18665	0.51	-1.4
4,107,960	+		AO353_18665	0.51	-1.3
4,107,960	+		AO353_18665	0.51	+2.8
4,107,960	+		AO353_18665	0.51	-0.6
4,107,960	+		AO353_18665	0.51	-1.3
4,107,961	-		AO353_18665	0.51	-2.9
4,107,961	-		AO353_18665	0.51	-1.5
4,107,961	-		AO353_18665	0.51	-1.1
4,107,961	-		AO353_18665	0.51	-1.6
4,107,961	-		AO353_18665	0.51	-1.2
4,108,214	+		AO353_18665	0.72	-0.9
4,108,215	-		AO353_18665	0.72	-0.9
4,108,215	-		AO353_18665	0.72	-1.6
4,108,215	-		AO353_18665	0.72	-1.9