Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2462 and Pf6N2E2_2463 are separated by 120 nucleotides Pf6N2E2_2463 and Pf6N2E2_2464 overlap by 4 nucleotides Pf6N2E2_2464 and Pf6N2E2_2465 are separated by 7 nucleotides
Pf6N2E2_2462 - FIG00956413: hypothetical protein, at 2,912,343 to 2,913,476
_2462
Pf6N2E2_2463 - FIG00957049: hypothetical protein, at 2,913,597 to 2,913,983
_2463
Pf6N2E2_2464 - Transcription elongation factor, at 2,913,980 to 2,914,468
_2464
Pf6N2E2_2465 - Cys regulon transcriptional activator CysB, at 2,914,476 to 2,915,450
_2465
Position (kb)
2913
2914
2915 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2913.515 kb on - strand at 2913.546 kb on + strand at 2913.547 kb on - strand at 2913.547 kb on - strand at 2913.563 kb on + strand at 2914.112 kb on + strand, within Pf6N2E2_2464 at 2914.113 kb on - strand, within Pf6N2E2_2464 at 2914.113 kb on - strand, within Pf6N2E2_2464 at 2914.139 kb on + strand, within Pf6N2E2_2464 at 2914.139 kb on + strand, within Pf6N2E2_2464 at 2914.140 kb on - strand, within Pf6N2E2_2464 at 2914.140 kb on - strand, within Pf6N2E2_2464 at 2914.140 kb on - strand, within Pf6N2E2_2464 at 2914.140 kb on - strand, within Pf6N2E2_2464 at 2914.140 kb on - strand, within Pf6N2E2_2464 at 2914.176 kb on + strand, within Pf6N2E2_2464 at 2914.176 kb on + strand, within Pf6N2E2_2464 at 2914.177 kb on - strand, within Pf6N2E2_2464 at 2914.177 kb on - strand, within Pf6N2E2_2464 at 2914.177 kb on - strand, within Pf6N2E2_2464 at 2914.212 kb on + strand, within Pf6N2E2_2464 at 2914.213 kb on - strand, within Pf6N2E2_2464 at 2914.220 kb on + strand, within Pf6N2E2_2464 at 2914.221 kb on - strand, within Pf6N2E2_2464 at 2914.263 kb on + strand, within Pf6N2E2_2464 at 2914.264 kb on - strand, within Pf6N2E2_2464 at 2914.414 kb on - strand, within Pf6N2E2_2464 at 2914.414 kb on - strand, within Pf6N2E2_2464 at 2914.414 kb on - strand, within Pf6N2E2_2464 at 2914.466 kb on + strand at 2914.467 kb on - strand at 2914.467 kb on - strand at 2914.467 kb on - strand at 2914.467 kb on - strand at 2914.477 kb on + strand at 2914.477 kb on + strand at 2914.477 kb on + strand at 2914.478 kb on - strand at 2914.754 kb on - strand, within Pf6N2E2_2465 at 2914.754 kb on - strand, within Pf6N2E2_2465 at 2914.857 kb on + strand, within Pf6N2E2_2465 at 2914.858 kb on - strand, within Pf6N2E2_2465 at 2914.858 kb on - strand, within Pf6N2E2_2465 at 2914.861 kb on + strand, within Pf6N2E2_2465 at 2914.862 kb on - strand, within Pf6N2E2_2465 at 2914.862 kb on - strand, within Pf6N2E2_2465 at 2914.862 kb on - strand, within Pf6N2E2_2465 at 2914.862 kb on - strand, within Pf6N2E2_2465 at 2914.862 kb on - strand, within Pf6N2E2_2465 at 2914.862 kb on - strand, within Pf6N2E2_2465 at 2914.862 kb on - strand, within Pf6N2E2_2465 at 2914.961 kb on - strand, within Pf6N2E2_2465 at 2915.372 kb on - strand at 2915.372 kb on - strand at 2915.428 kb on + strand at 2915.450 kb on + strand at 2915.450 kb on + strand at 2915.450 kb on + strand at 2915.450 kb on + strand at 2915.450 kb on + strand at 2915.450 kb on + strand at 2915.451 kb on - strand at 2915.451 kb on - strand at 2915.451 kb on - strand at 2915.451 kb on - strand at 2915.451 kb on - strand at 2915.451 kb on - strand at 2915.451 kb on - strand at 2915.451 kb on - strand at 2915.454 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 2,913,515 - +0.4 2,913,546 + +0.3 2,913,547 - +0.2 2,913,547 - +0.2 2,913,563 + -0.5 2,914,112 + Pf6N2E2_2464 0.27 -1.4 2,914,113 - Pf6N2E2_2464 0.27 +0.5 2,914,113 - Pf6N2E2_2464 0.27 +0.2 2,914,139 + Pf6N2E2_2464 0.33 +0.1 2,914,139 + Pf6N2E2_2464 0.33 +0.2 2,914,140 - Pf6N2E2_2464 0.33 +0.3 2,914,140 - Pf6N2E2_2464 0.33 +0.6 2,914,140 - Pf6N2E2_2464 0.33 -0.5 2,914,140 - Pf6N2E2_2464 0.33 +0.4 2,914,140 - Pf6N2E2_2464 0.33 -0.4 2,914,176 + Pf6N2E2_2464 0.40 +0.6 2,914,176 + Pf6N2E2_2464 0.40 -1.4 2,914,177 - Pf6N2E2_2464 0.40 -0.6 2,914,177 - Pf6N2E2_2464 0.40 +0.6 2,914,177 - Pf6N2E2_2464 0.40 +1.1 2,914,212 + Pf6N2E2_2464 0.47 +1.2 2,914,213 - Pf6N2E2_2464 0.48 +0.1 2,914,220 + Pf6N2E2_2464 0.49 +0.4 2,914,221 - Pf6N2E2_2464 0.49 +0.6 2,914,263 + Pf6N2E2_2464 0.58 +0.4 2,914,264 - Pf6N2E2_2464 0.58 +0.2 2,914,414 - Pf6N2E2_2464 0.89 -1.4 2,914,414 - Pf6N2E2_2464 0.89 +0.8 2,914,414 - Pf6N2E2_2464 0.89 +2.2 2,914,466 + +0.8 2,914,467 - +1.3 2,914,467 - -0.1 2,914,467 - +0.4 2,914,467 - -0.2 2,914,477 + +1.2 2,914,477 + +0.5 2,914,477 + +0.4 2,914,478 - +0.3 2,914,754 - Pf6N2E2_2465 0.29 +1.4 2,914,754 - Pf6N2E2_2465 0.29 +1.1 2,914,857 + Pf6N2E2_2465 0.39 +0.2 2,914,858 - Pf6N2E2_2465 0.39 +1.7 2,914,858 - Pf6N2E2_2465 0.39 +0.8 2,914,861 + Pf6N2E2_2465 0.39 +1.2 2,914,862 - Pf6N2E2_2465 0.40 +1.2 2,914,862 - Pf6N2E2_2465 0.40 +2.0 2,914,862 - Pf6N2E2_2465 0.40 +1.9 2,914,862 - Pf6N2E2_2465 0.40 +1.0 2,914,862 - Pf6N2E2_2465 0.40 +1.5 2,914,862 - Pf6N2E2_2465 0.40 +1.5 2,914,862 - Pf6N2E2_2465 0.40 +2.3 2,914,961 - Pf6N2E2_2465 0.50 +1.2 2,915,372 - -1.0 2,915,372 - +0.1 2,915,428 + -3.0 2,915,450 + -0.8 2,915,450 + -0.3 2,915,450 + -1.8 2,915,450 + -0.3 2,915,450 + -0.3 2,915,450 + -1.4 2,915,451 - -1.9 2,915,451 - +0.4 2,915,451 - -0.2 2,915,451 - +0.4 2,915,451 - -0.5 2,915,451 - -1.3 2,915,451 - -2.3 2,915,451 - -1.2 2,915,454 + -2.0
Or see this region's nucleotide sequence