Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22350 and BWI76_RS22355 overlap by 10 nucleotides BWI76_RS22355 and BWI76_RS22360 are separated by 0 nucleotides BWI76_RS22360 and BWI76_RS22365 overlap by 4 nucleotides
BWI76_RS22350: BWI76_RS22350 - hydrogenase nickel incorporation protein HypB, at 4,658,330 to 4,659,202
_RS22350
BWI76_RS22355: BWI76_RS22355 - hydrogenase assembly chaperone, at 4,659,193 to 4,659,465
_RS22355
BWI76_RS22360: BWI76_RS22360 - hydrogenase formation protein HypD, at 4,659,466 to 4,660,587
_RS22360
BWI76_RS22365: BWI76_RS22365 - hydrogenase expression/formation protein HypE, at 4,660,584 to 4,661,594
_RS22365
Position (kb) 4659
4660
4661 Strain fitness (log2 ratio) -1
0
1
2 at 4658.470 kb on + strand, within BWI76_RS22350 at 4658.478 kb on - strand, within BWI76_RS22350 at 4658.745 kb on - strand, within BWI76_RS22350 at 4658.745 kb on - strand, within BWI76_RS22350 at 4658.950 kb on + strand, within BWI76_RS22350 at 4659.156 kb on + strand at 4659.163 kb on - strand at 4659.254 kb on - strand, within BWI76_RS22355 at 4659.334 kb on + strand, within BWI76_RS22355 at 4659.936 kb on - strand, within BWI76_RS22360 at 4660.068 kb on + strand, within BWI76_RS22360 at 4660.101 kb on - strand, within BWI76_RS22360 at 4660.135 kb on - strand, within BWI76_RS22360 at 4660.196 kb on - strand, within BWI76_RS22360 at 4660.407 kb on + strand, within BWI76_RS22360 at 4660.615 kb on - strand at 4660.678 kb on - strand at 4661.187 kb on + strand, within BWI76_RS22365 at 4661.235 kb on + strand, within BWI76_RS22365 at 4661.416 kb on - strand, within BWI76_RS22365 at 4661.524 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 4,658,470 + BWI76_RS22350 0.16 +0.9 4,658,478 - BWI76_RS22350 0.17 -1.4 4,658,745 - BWI76_RS22350 0.48 -0.5 4,658,745 - BWI76_RS22350 0.48 +0.3 4,658,950 + BWI76_RS22350 0.71 +0.6 4,659,156 + +0.0 4,659,163 - +0.6 4,659,254 - BWI76_RS22355 0.22 +1.8 4,659,334 + BWI76_RS22355 0.52 +0.2 4,659,936 - BWI76_RS22360 0.42 -0.1 4,660,068 + BWI76_RS22360 0.54 +0.5 4,660,101 - BWI76_RS22360 0.57 +1.9 4,660,135 - BWI76_RS22360 0.60 +0.4 4,660,196 - BWI76_RS22360 0.65 +0.3 4,660,407 + BWI76_RS22360 0.84 +2.1 4,660,615 - +0.0 4,660,678 - +0.4 4,661,187 + BWI76_RS22365 0.60 +0.0 4,661,235 + BWI76_RS22365 0.64 -0.3 4,661,416 - BWI76_RS22365 0.82 +0.2 4,661,524 + -0.0
Or see this region's nucleotide sequence