Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18285 and BWI76_RS18290 are separated by 36 nucleotides BWI76_RS18290 and BWI76_RS18295 are separated by 193 nucleotides BWI76_RS18295 and BWI76_RS18300 are separated by 30 nucleotides BWI76_RS18300 and BWI76_RS18305 are separated by 66 nucleotides
BWI76_RS18285: BWI76_RS18285 - ferritin, at 3,800,509 to 3,801,006
_RS18285
BWI76_RS18290: BWI76_RS18290 - hypothetical protein, at 3,801,043 to 3,801,282
_RS18290
BWI76_RS18295: BWI76_RS18295 - tyrosine transporter TyrP, at 3,801,476 to 3,802,687
_RS18295
BWI76_RS18300: BWI76_RS18300 - hypothetical protein, at 3,802,718 to 3,803,386
_RS18300
BWI76_RS18305: BWI76_RS18305 - dihydrodipicolinate synthase family protein, at 3,803,453 to 3,804,340
_RS18305
Position (kb)
3801
3802
3803 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3800.481 kb on - strand at 3800.547 kb on + strand at 3800.547 kb on + strand at 3800.547 kb on + strand at 3800.555 kb on - strand at 3800.593 kb on + strand, within BWI76_RS18285 at 3800.601 kb on - strand, within BWI76_RS18285 at 3800.612 kb on + strand, within BWI76_RS18285 at 3800.656 kb on + strand, within BWI76_RS18285 at 3800.660 kb on - strand, within BWI76_RS18285 at 3800.663 kb on + strand, within BWI76_RS18285 at 3800.663 kb on + strand, within BWI76_RS18285 at 3800.663 kb on + strand, within BWI76_RS18285 at 3800.663 kb on + strand, within BWI76_RS18285 at 3800.663 kb on + strand, within BWI76_RS18285 at 3800.663 kb on + strand, within BWI76_RS18285 at 3800.663 kb on + strand, within BWI76_RS18285 at 3800.663 kb on + strand, within BWI76_RS18285 at 3800.663 kb on + strand, within BWI76_RS18285 at 3800.671 kb on - strand, within BWI76_RS18285 at 3800.671 kb on - strand, within BWI76_RS18285 at 3800.699 kb on + strand, within BWI76_RS18285 at 3800.699 kb on + strand, within BWI76_RS18285 at 3800.699 kb on + strand, within BWI76_RS18285 at 3800.707 kb on - strand, within BWI76_RS18285 at 3800.722 kb on + strand, within BWI76_RS18285 at 3800.743 kb on + strand, within BWI76_RS18285 at 3800.743 kb on + strand, within BWI76_RS18285 at 3800.751 kb on - strand, within BWI76_RS18285 at 3800.766 kb on + strand, within BWI76_RS18285 at 3800.766 kb on + strand, within BWI76_RS18285 at 3800.766 kb on + strand, within BWI76_RS18285 at 3800.791 kb on + strand, within BWI76_RS18285 at 3800.815 kb on + strand, within BWI76_RS18285 at 3800.839 kb on + strand, within BWI76_RS18285 at 3800.839 kb on + strand, within BWI76_RS18285 at 3800.871 kb on + strand, within BWI76_RS18285 at 3800.871 kb on + strand, within BWI76_RS18285 at 3800.871 kb on + strand, within BWI76_RS18285 at 3800.879 kb on + strand, within BWI76_RS18285 at 3800.879 kb on + strand, within BWI76_RS18285 at 3800.879 kb on + strand, within BWI76_RS18285 at 3800.879 kb on + strand, within BWI76_RS18285 at 3800.879 kb on + strand, within BWI76_RS18285 at 3800.879 kb on + strand, within BWI76_RS18285 at 3800.879 kb on + strand, within BWI76_RS18285 at 3800.879 kb on - strand, within BWI76_RS18285 at 3800.879 kb on - strand, within BWI76_RS18285 at 3800.879 kb on - strand, within BWI76_RS18285 at 3800.881 kb on + strand, within BWI76_RS18285 at 3800.887 kb on - strand, within BWI76_RS18285 at 3800.887 kb on - strand, within BWI76_RS18285 at 3800.887 kb on - strand, within BWI76_RS18285 at 3800.889 kb on - strand, within BWI76_RS18285 at 3800.896 kb on + strand, within BWI76_RS18285 at 3800.907 kb on + strand, within BWI76_RS18285 at 3800.915 kb on - strand, within BWI76_RS18285 at 3800.926 kb on + strand, within BWI76_RS18285 at 3800.939 kb on - strand at 3800.990 kb on - strand at 3801.031 kb on - strand at 3801.031 kb on - strand at 3801.031 kb on - strand at 3801.031 kb on - strand at 3801.087 kb on - strand, within BWI76_RS18290 at 3801.087 kb on - strand, within BWI76_RS18290 at 3801.087 kb on - strand, within BWI76_RS18290 at 3801.100 kb on - strand, within BWI76_RS18290 at 3801.129 kb on + strand, within BWI76_RS18290 at 3801.137 kb on - strand, within BWI76_RS18290 at 3801.221 kb on + strand, within BWI76_RS18290 at 3801.221 kb on + strand, within BWI76_RS18290 at 3801.221 kb on + strand, within BWI76_RS18290 at 3801.221 kb on + strand, within BWI76_RS18290 at 3801.229 kb on - strand, within BWI76_RS18290 at 3801.229 kb on - strand, within BWI76_RS18290 at 3801.229 kb on - strand, within BWI76_RS18290 at 3801.229 kb on - strand, within BWI76_RS18290 at 3801.229 kb on - strand, within BWI76_RS18290 at 3801.229 kb on - strand, within BWI76_RS18290 at 3801.229 kb on - strand, within BWI76_RS18290 at 3801.229 kb on - strand, within BWI76_RS18290 at 3801.229 kb on - strand, within BWI76_RS18290 at 3801.250 kb on + strand, within BWI76_RS18290 at 3801.691 kb on + strand, within BWI76_RS18295 at 3801.873 kb on - strand, within BWI76_RS18295 at 3801.888 kb on + strand, within BWI76_RS18295 at 3801.978 kb on - strand, within BWI76_RS18295 at 3802.015 kb on + strand, within BWI76_RS18295 at 3802.208 kb on - strand, within BWI76_RS18295 at 3802.237 kb on + strand, within BWI76_RS18295 at 3802.439 kb on + strand, within BWI76_RS18295 at 3802.481 kb on + strand, within BWI76_RS18295 at 3802.672 kb on - strand at 3802.788 kb on - strand, within BWI76_RS18300 at 3802.839 kb on + strand, within BWI76_RS18300 at 3803.016 kb on - strand, within BWI76_RS18300 at 3803.249 kb on - strand, within BWI76_RS18300
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 3,800,481 - +0.5 3,800,547 + -0.2 3,800,547 + +0.4 3,800,547 + +0.7 3,800,555 - +0.4 3,800,593 + BWI76_RS18285 0.17 +1.5 3,800,601 - BWI76_RS18285 0.18 -0.6 3,800,612 + BWI76_RS18285 0.21 +0.5 3,800,656 + BWI76_RS18285 0.30 -1.3 3,800,660 - BWI76_RS18285 0.30 -0.8 3,800,663 + BWI76_RS18285 0.31 +0.5 3,800,663 + BWI76_RS18285 0.31 -0.3 3,800,663 + BWI76_RS18285 0.31 -0.7 3,800,663 + BWI76_RS18285 0.31 -0.2 3,800,663 + BWI76_RS18285 0.31 +0.4 3,800,663 + BWI76_RS18285 0.31 -0.2 3,800,663 + BWI76_RS18285 0.31 -0.1 3,800,663 + BWI76_RS18285 0.31 -0.3 3,800,663 + BWI76_RS18285 0.31 -0.4 3,800,671 - BWI76_RS18285 0.33 -0.4 3,800,671 - BWI76_RS18285 0.33 -1.7 3,800,699 + BWI76_RS18285 0.38 +0.6 3,800,699 + BWI76_RS18285 0.38 -0.1 3,800,699 + BWI76_RS18285 0.38 -0.7 3,800,707 - BWI76_RS18285 0.40 +0.8 3,800,722 + BWI76_RS18285 0.43 +0.7 3,800,743 + BWI76_RS18285 0.47 -0.7 3,800,743 + BWI76_RS18285 0.47 +0.2 3,800,751 - BWI76_RS18285 0.49 +0.3 3,800,766 + BWI76_RS18285 0.52 -0.4 3,800,766 + BWI76_RS18285 0.52 +2.5 3,800,766 + BWI76_RS18285 0.52 -0.7 3,800,791 + BWI76_RS18285 0.57 -0.7 3,800,815 + BWI76_RS18285 0.61 +1.6 3,800,839 + BWI76_RS18285 0.66 +0.4 3,800,839 + BWI76_RS18285 0.66 -0.2 3,800,871 + BWI76_RS18285 0.73 -0.5 3,800,871 + BWI76_RS18285 0.73 +0.7 3,800,871 + BWI76_RS18285 0.73 -0.4 3,800,879 + BWI76_RS18285 0.74 +0.1 3,800,879 + BWI76_RS18285 0.74 -0.4 3,800,879 + BWI76_RS18285 0.74 -2.8 3,800,879 + BWI76_RS18285 0.74 +0.3 3,800,879 + BWI76_RS18285 0.74 -0.8 3,800,879 + BWI76_RS18285 0.74 +0.2 3,800,879 + BWI76_RS18285 0.74 +0.0 3,800,879 - BWI76_RS18285 0.74 +0.2 3,800,879 - BWI76_RS18285 0.74 +0.3 3,800,879 - BWI76_RS18285 0.74 +0.1 3,800,881 + BWI76_RS18285 0.75 -0.0 3,800,887 - BWI76_RS18285 0.76 +0.1 3,800,887 - BWI76_RS18285 0.76 -0.3 3,800,887 - BWI76_RS18285 0.76 +0.0 3,800,889 - BWI76_RS18285 0.76 -1.2 3,800,896 + BWI76_RS18285 0.78 -0.1 3,800,907 + BWI76_RS18285 0.80 -0.9 3,800,915 - BWI76_RS18285 0.82 +0.3 3,800,926 + BWI76_RS18285 0.84 +0.0 3,800,939 - +0.8 3,800,990 - -0.5 3,801,031 - +0.1 3,801,031 - +0.5 3,801,031 - +0.4 3,801,031 - +0.0 3,801,087 - BWI76_RS18290 0.18 +0.3 3,801,087 - BWI76_RS18290 0.18 +0.6 3,801,087 - BWI76_RS18290 0.18 -0.1 3,801,100 - BWI76_RS18290 0.24 +0.1 3,801,129 + BWI76_RS18290 0.36 -0.1 3,801,137 - BWI76_RS18290 0.39 -1.1 3,801,221 + BWI76_RS18290 0.74 +0.9 3,801,221 + BWI76_RS18290 0.74 -0.2 3,801,221 + BWI76_RS18290 0.74 +0.8 3,801,221 + BWI76_RS18290 0.74 +0.9 3,801,229 - BWI76_RS18290 0.78 -0.2 3,801,229 - BWI76_RS18290 0.78 +0.0 3,801,229 - BWI76_RS18290 0.78 -0.0 3,801,229 - BWI76_RS18290 0.78 -0.2 3,801,229 - BWI76_RS18290 0.78 +0.7 3,801,229 - BWI76_RS18290 0.78 -0.2 3,801,229 - BWI76_RS18290 0.78 +0.9 3,801,229 - BWI76_RS18290 0.78 +0.7 3,801,229 - BWI76_RS18290 0.78 +0.3 3,801,250 + BWI76_RS18290 0.86 +1.1 3,801,691 + BWI76_RS18295 0.18 +0.5 3,801,873 - BWI76_RS18295 0.33 +0.7 3,801,888 + BWI76_RS18295 0.34 -0.2 3,801,978 - BWI76_RS18295 0.41 +1.5 3,802,015 + BWI76_RS18295 0.44 +0.7 3,802,208 - BWI76_RS18295 0.60 +0.4 3,802,237 + BWI76_RS18295 0.63 +0.3 3,802,439 + BWI76_RS18295 0.79 +0.3 3,802,481 + BWI76_RS18295 0.83 +0.3 3,802,672 - +0.7 3,802,788 - BWI76_RS18300 0.10 +2.8 3,802,839 + BWI76_RS18300 0.18 +0.8 3,803,016 - BWI76_RS18300 0.45 +0.1 3,803,249 - BWI76_RS18300 0.79 -0.2
Or see this region's nucleotide sequence