Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS01295 and BWI76_RS01300 are separated by 138 nucleotides BWI76_RS01300 and BWI76_RS01305 are separated by 70 nucleotides BWI76_RS01305 and BWI76_RS01310 are separated by 13 nucleotides
BWI76_RS01295: BWI76_RS01295 - Uridine phosphorylase (EC 2.4.2.3) <small>(from data)</small>, at 266,181 to 266,942
_RS01295
BWI76_RS01300: BWI76_RS01300 - DNA recombination protein RmuC, at 267,081 to 268,529
_RS01300
BWI76_RS01305: BWI76_RS01305 - bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, at 268,600 to 269,355
_RS01305
BWI76_RS01310: BWI76_RS01310 - SCP2 domain-containing protein, at 269,369 to 269,974
_RS01310
Position (kb) 267
268
269 Strain fitness (log2 ratio) -1
0
1
2 at 266.233 kb on + strand at 266.251 kb on + strand at 266.354 kb on - strand, within BWI76_RS01295 at 266.362 kb on - strand at 266.423 kb on + strand, within BWI76_RS01295 at 266.533 kb on + strand, within BWI76_RS01295 at 266.600 kb on + strand, within BWI76_RS01295 at 266.600 kb on + strand, within BWI76_RS01295 at 266.670 kb on - strand, within BWI76_RS01295 at 266.678 kb on + strand, within BWI76_RS01295 at 266.945 kb on - strand at 267.210 kb on + strand at 267.264 kb on - strand, within BWI76_RS01300 at 267.264 kb on - strand, within BWI76_RS01300 at 267.275 kb on + strand, within BWI76_RS01300 at 267.527 kb on + strand, within BWI76_RS01300 at 267.535 kb on - strand, within BWI76_RS01300 at 267.738 kb on - strand, within BWI76_RS01300 at 267.764 kb on - strand, within BWI76_RS01300 at 267.921 kb on + strand, within BWI76_RS01300 at 268.163 kb on - strand, within BWI76_RS01300
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 266,233 + +0.0 266,251 + -0.0 266,354 - BWI76_RS01295 0.23 -0.8 266,362 - +2.5 266,423 + BWI76_RS01295 0.32 +0.3 266,533 + BWI76_RS01295 0.46 -0.0 266,600 + BWI76_RS01295 0.55 -0.4 266,600 + BWI76_RS01295 0.55 +0.0 266,670 - BWI76_RS01295 0.64 -0.5 266,678 + BWI76_RS01295 0.65 -0.0 266,945 - +0.5 267,210 + -0.5 267,264 - BWI76_RS01300 0.13 +1.5 267,264 - BWI76_RS01300 0.13 -0.3 267,275 + BWI76_RS01300 0.13 +0.7 267,527 + BWI76_RS01300 0.31 -0.2 267,535 - BWI76_RS01300 0.31 +0.9 267,738 - BWI76_RS01300 0.45 +0.3 267,764 - BWI76_RS01300 0.47 +0.1 267,921 + BWI76_RS01300 0.58 +0.2 268,163 - BWI76_RS01300 0.75 +1.4
Or see this region's nucleotide sequence