Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00555 and BWI76_RS00560 overlap by 4 nucleotides BWI76_RS00560 and BWI76_RS00565 are separated by 90 nucleotides BWI76_RS00565 and BWI76_RS00570 overlap by 1 nucleotides BWI76_RS00570 and BWI76_RS00575 are separated by 100 nucleotides BWI76_RS00575 and BWI76_RS00580 are separated by 229 nucleotides
BWI76_RS00555: BWI76_RS00555 - PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN, at 112,748 to 113,185
_RS00555
BWI76_RS00560: BWI76_RS00560 - hypothetical protein, at 113,182 to 113,736
_RS00560
BWI76_RS00565: BWI76_RS00565 - branched-chain amino acid transport, at 113,827 to 114,150
_RS00565
BWI76_RS00570: BWI76_RS00570 - AzlC family protein, at 114,150 to 114,809
_RS00570
BWI76_RS00575: BWI76_RS00575 - DNA-binding protein, at 114,910 to 115,458
_RS00575
BWI76_RS00580: BWI76_RS00580 - ribokinase, at 115,688 to 116,899
_RS00580
Position (kb)
114
115 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 113.157 kb on + strand at 113.157 kb on + strand at 113.165 kb on - strand at 113.165 kb on - strand at 113.168 kb on - strand at 113.179 kb on + strand at 113.179 kb on + strand at 113.187 kb on - strand at 113.193 kb on + strand at 113.309 kb on + strand, within BWI76_RS00560 at 113.346 kb on + strand, within BWI76_RS00560 at 113.540 kb on + strand, within BWI76_RS00560 at 113.590 kb on - strand, within BWI76_RS00560 at 113.686 kb on + strand at 113.702 kb on - strand at 113.970 kb on + strand, within BWI76_RS00565 at 113.970 kb on + strand, within BWI76_RS00565 at 113.996 kb on + strand, within BWI76_RS00565 at 114.014 kb on - strand, within BWI76_RS00565 at 114.032 kb on + strand, within BWI76_RS00565 at 114.255 kb on + strand, within BWI76_RS00570 at 114.255 kb on + strand, within BWI76_RS00570 at 114.448 kb on - strand, within BWI76_RS00570 at 114.461 kb on + strand, within BWI76_RS00570 at 114.539 kb on + strand, within BWI76_RS00570 at 114.547 kb on - strand, within BWI76_RS00570 at 114.547 kb on - strand, within BWI76_RS00570 at 114.547 kb on - strand, within BWI76_RS00570 at 114.646 kb on - strand, within BWI76_RS00570 at 114.679 kb on - strand, within BWI76_RS00570 at 114.704 kb on - strand, within BWI76_RS00570 at 114.718 kb on + strand, within BWI76_RS00570 at 114.726 kb on - strand, within BWI76_RS00570 at 114.761 kb on - strand at 114.775 kb on - strand at 114.911 kb on - strand at 114.916 kb on - strand at 114.967 kb on + strand, within BWI76_RS00575 at 115.127 kb on - strand, within BWI76_RS00575 at 115.231 kb on + strand, within BWI76_RS00575 at 115.301 kb on + strand, within BWI76_RS00575 at 115.312 kb on + strand, within BWI76_RS00575 at 115.312 kb on + strand, within BWI76_RS00575 at 115.320 kb on - strand, within BWI76_RS00575 at 115.355 kb on + strand, within BWI76_RS00575 at 115.377 kb on - strand, within BWI76_RS00575 at 115.385 kb on - strand, within BWI76_RS00575 at 115.395 kb on + strand, within BWI76_RS00575 at 115.403 kb on + strand, within BWI76_RS00575 at 115.420 kb on - strand at 115.425 kb on + strand at 115.427 kb on + strand at 115.427 kb on + strand at 115.427 kb on + strand at 115.427 kb on + strand at 115.427 kb on + strand at 115.435 kb on - strand at 115.435 kb on - strand at 115.435 kb on - strand at 115.435 kb on - strand at 115.437 kb on + strand at 115.437 kb on + strand at 115.437 kb on + strand at 115.437 kb on + strand at 115.445 kb on - strand at 115.445 kb on - strand at 115.445 kb on - strand at 115.445 kb on - strand at 115.445 kb on - strand at 115.445 kb on - strand at 115.445 kb on - strand at 115.452 kb on + strand at 115.460 kb on - strand at 115.498 kb on + strand at 115.498 kb on + strand at 115.498 kb on + strand at 115.500 kb on + strand at 115.506 kb on - strand at 115.506 kb on - strand at 115.508 kb on + strand at 115.508 kb on - strand at 115.516 kb on - strand at 115.533 kb on + strand at 115.545 kb on + strand at 115.623 kb on + strand at 115.623 kb on + strand at 115.623 kb on + strand at 115.623 kb on + strand at 115.623 kb on + strand at 115.623 kb on + strand at 115.628 kb on + strand at 115.629 kb on + strand at 115.631 kb on - strand at 115.631 kb on - strand at 115.631 kb on - strand at 115.635 kb on + strand at 115.635 kb on + strand at 115.635 kb on + strand at 115.637 kb on + strand at 115.637 kb on + strand at 115.637 kb on + strand at 115.637 kb on + strand at 115.637 kb on + strand at 115.637 kb on + strand at 115.637 kb on + strand at 115.637 kb on + strand at 115.637 kb on + strand at 115.642 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on + strand at 115.643 kb on - strand at 115.643 kb on - strand at 115.643 kb on - strand at 115.643 kb on - strand at 115.645 kb on + strand at 115.645 kb on + strand at 115.645 kb on + strand at 115.645 kb on + strand at 115.645 kb on - strand at 115.645 kb on - strand at 115.645 kb on - strand at 115.645 kb on - strand at 115.645 kb on - strand at 115.650 kb on - strand at 115.650 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.651 kb on - strand at 115.653 kb on + strand at 115.653 kb on + strand at 115.653 kb on + strand at 115.653 kb on + strand at 115.653 kb on - strand at 115.653 kb on - strand at 115.653 kb on - strand at 115.653 kb on - strand at 115.653 kb on - strand at 115.653 kb on - strand at 115.653 kb on - strand at 115.654 kb on + strand at 115.654 kb on + strand at 115.654 kb on + strand at 115.654 kb on + strand at 115.654 kb on + strand at 115.657 kb on + strand at 115.662 kb on - strand at 115.662 kb on - strand at 115.662 kb on - strand at 115.662 kb on - strand at 115.665 kb on - strand at 115.665 kb on - strand at 115.669 kb on + strand at 115.670 kb on - strand at 115.725 kb on + strand at 115.804 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 113,157 + -0.4 113,157 + +0.9 113,165 - +0.6 113,165 - -0.7 113,168 - -0.2 113,179 + +0.2 113,179 + +1.0 113,187 - +0.6 113,193 + -0.2 113,309 + BWI76_RS00560 0.23 +0.4 113,346 + BWI76_RS00560 0.30 +0.5 113,540 + BWI76_RS00560 0.65 +0.0 113,590 - BWI76_RS00560 0.74 -0.1 113,686 + -0.0 113,702 - -0.4 113,970 + BWI76_RS00565 0.44 +0.1 113,970 + BWI76_RS00565 0.44 -0.5 113,996 + BWI76_RS00565 0.52 +1.1 114,014 - BWI76_RS00565 0.58 -3.2 114,032 + BWI76_RS00565 0.63 -0.2 114,255 + BWI76_RS00570 0.16 -0.1 114,255 + BWI76_RS00570 0.16 +0.3 114,448 - BWI76_RS00570 0.45 -0.2 114,461 + BWI76_RS00570 0.47 +0.8 114,539 + BWI76_RS00570 0.59 +0.3 114,547 - BWI76_RS00570 0.60 +0.8 114,547 - BWI76_RS00570 0.60 +0.7 114,547 - BWI76_RS00570 0.60 +0.8 114,646 - BWI76_RS00570 0.75 +0.1 114,679 - BWI76_RS00570 0.80 +1.0 114,704 - BWI76_RS00570 0.84 +0.1 114,718 + BWI76_RS00570 0.86 +0.5 114,726 - BWI76_RS00570 0.87 +2.0 114,761 - +0.7 114,775 - +0.1 114,911 - +0.3 114,916 - +0.1 114,967 + BWI76_RS00575 0.10 +0.2 115,127 - BWI76_RS00575 0.40 -2.4 115,231 + BWI76_RS00575 0.58 -0.0 115,301 + BWI76_RS00575 0.71 +0.1 115,312 + BWI76_RS00575 0.73 +0.0 115,312 + BWI76_RS00575 0.73 -0.4 115,320 - BWI76_RS00575 0.75 +0.5 115,355 + BWI76_RS00575 0.81 -0.1 115,377 - BWI76_RS00575 0.85 -0.6 115,385 - BWI76_RS00575 0.87 +1.0 115,395 + BWI76_RS00575 0.88 +0.1 115,403 + BWI76_RS00575 0.90 +0.7 115,420 - -0.2 115,425 + -0.8 115,427 + -0.1 115,427 + +1.2 115,427 + -1.3 115,427 + +0.2 115,427 + +0.2 115,435 - -0.8 115,435 - -0.6 115,435 - +2.5 115,435 - +0.3 115,437 + +0.6 115,437 + +1.4 115,437 + -0.7 115,437 + -0.0 115,445 - -0.1 115,445 - +3.3 115,445 - +0.4 115,445 - -0.5 115,445 - -0.9 115,445 - +0.6 115,445 - +0.4 115,452 + +0.2 115,460 - +1.0 115,498 + +0.9 115,498 + -0.0 115,498 + -0.2 115,500 + -0.0 115,506 - -0.3 115,506 - +0.1 115,508 + +0.0 115,508 - +0.9 115,516 - -0.9 115,533 + -0.4 115,545 + -0.0 115,623 + +0.1 115,623 + +0.3 115,623 + +0.7 115,623 + -2.7 115,623 + +1.1 115,623 + +0.6 115,628 + -1.1 115,629 + +0.3 115,631 - +0.5 115,631 - +1.5 115,631 - +1.8 115,635 + -0.7 115,635 + -0.1 115,635 + +0.9 115,637 + +0.6 115,637 + -0.5 115,637 + -0.0 115,637 + -0.1 115,637 + +0.0 115,637 + +0.2 115,637 + +0.9 115,637 + +0.2 115,637 + +0.3 115,642 + +0.3 115,643 + -0.5 115,643 + -0.0 115,643 + -1.5 115,643 + +2.1 115,643 + -0.2 115,643 + -0.5 115,643 + +1.0 115,643 + +0.2 115,643 + +0.2 115,643 + -0.4 115,643 + +0.0 115,643 + -0.1 115,643 + -0.1 115,643 + +1.1 115,643 + +0.2 115,643 + -0.6 115,643 + -0.1 115,643 + -0.7 115,643 + -0.4 115,643 + -0.0 115,643 + -0.7 115,643 + +0.6 115,643 + +0.6 115,643 + +0.3 115,643 + +0.6 115,643 + -1.0 115,643 + +0.3 115,643 + +1.3 115,643 + +0.2 115,643 + +0.0 115,643 + -1.0 115,643 + -0.5 115,643 + -0.2 115,643 + -1.9 115,643 + +1.2 115,643 + +0.0 115,643 + +0.3 115,643 + -0.2 115,643 + -0.0 115,643 + +0.8 115,643 + -1.0 115,643 + -0.1 115,643 + +0.2 115,643 + -0.4 115,643 + -0.0 115,643 + -0.6 115,643 + -0.0 115,643 + +0.7 115,643 + -0.0 115,643 + -0.2 115,643 + +0.2 115,643 + -1.3 115,643 + -1.1 115,643 + +0.2 115,643 + -0.7 115,643 + +0.4 115,643 + +0.4 115,643 + -0.2 115,643 + +1.3 115,643 + -0.0 115,643 + +0.1 115,643 + +0.7 115,643 + -0.5 115,643 + +0.4 115,643 - -0.1 115,643 - +0.4 115,643 - -0.0 115,643 - -0.1 115,645 + +1.0 115,645 + -0.2 115,645 + -0.3 115,645 + +0.3 115,645 - -0.2 115,645 - +0.3 115,645 - +0.3 115,645 - +0.6 115,645 - -0.4 115,650 - -1.1 115,650 - +1.7 115,651 - +0.9 115,651 - -0.3 115,651 - +3.1 115,651 - +0.5 115,651 - +1.0 115,651 - -0.1 115,651 - -0.3 115,651 - -0.7 115,651 - +0.0 115,651 - +0.0 115,651 - -0.2 115,651 - +0.8 115,651 - +0.4 115,651 - -0.9 115,651 - -0.3 115,651 - +0.4 115,651 - -0.5 115,651 - -0.3 115,651 - +0.6 115,651 - +0.8 115,651 - -0.2 115,651 - +0.0 115,651 - -0.5 115,651 - -0.2 115,651 - -0.1 115,651 - -0.1 115,651 - +0.2 115,651 - -0.1 115,651 - +1.5 115,651 - +0.4 115,651 - +1.1 115,651 - +0.1 115,651 - +0.8 115,651 - -0.2 115,651 - +0.6 115,651 - -0.6 115,651 - -0.3 115,651 - -0.9 115,651 - +0.6 115,651 - +1.9 115,651 - +1.3 115,651 - -0.5 115,653 + -0.1 115,653 + -0.5 115,653 + +0.3 115,653 + +0.0 115,653 - -0.9 115,653 - -0.8 115,653 - -0.6 115,653 - +2.4 115,653 - -0.1 115,653 - -0.3 115,653 - -0.5 115,654 + +0.1 115,654 + +0.3 115,654 + -0.2 115,654 + +0.4 115,654 + -0.8 115,657 + +0.4 115,662 - +0.0 115,662 - -0.2 115,662 - -0.8 115,662 - -0.1 115,665 - -1.2 115,665 - -0.7 115,669 + -1.3 115,670 - +0.2 115,725 + -0.3 115,804 + -0.0
Or see this region's nucleotide sequence