Strain Fitness in Methanococcus maripaludis S2 around MMP_RS08245

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,550,496	-		MMP_RS08240	0.23	-0.5
1,550,678	+		MMP_RS08240	0.39	-0.6
1,550,743	-		MMP_RS08240	0.44	-0.6
1,550,901	-		MMP_RS08240	0.58	-0.5
1,551,105	+		MMP_RS08240	0.75	-1.0
1,551,265	-		MMP_RS08240	0.89	-0.1
1,551,266	+		MMP_RS08240	0.89	-0.4
1,551,268	+		MMP_RS08240	0.89	-0.4
1,551,338	+				-0.2
1,551,357	+				-0.6
1,551,415	+				-0.4
1,551,609	-		MMP_RS08245	0.22	-0.2
1,551,610	+		MMP_RS08245	0.22	+0.2
1,551,610	+		MMP_RS08245	0.22	-0.3
1,551,682	+		MMP_RS08245	0.30	-0.2
1,551,769	-		MMP_RS08245	0.40	+0.6
1,551,770	+		MMP_RS08245	0.41	-0.0
1,551,770	+		MMP_RS08245	0.41	+0.1
1,551,864	-		MMP_RS08245	0.51	+0.4
1,551,865	+		MMP_RS08245	0.51	-0.1
1,551,894	-		MMP_RS08245	0.55	+0.5
1,552,036	-		MMP_RS08245	0.71	+0.1
1,552,107	+		MMP_RS08245	0.79	+0.6
1,552,271	+				+0.2
1,552,271	+				-0.1
1,552,314	+				-0.3
1,552,328	+				+0.8
1,552,329	-				+0.1
1,552,329	-				-0.2
1,552,329	-				-0.1
1,552,329	-				-0.3
1,552,330	+				+0.1
1,552,330	+				-0.1
1,552,333	-				+0.4
1,552,361	-				-0.1
1,552,361	-				+0.0
1,552,361	-				+0.4
1,552,362	+				-0.8
1,552,362	+				+0.0
1,552,362	+				-0.4
1,552,365	-				-0.3
1,552,365	-				+0.2
1,552,369	-				+0.1
1,552,380	+				-0.2
1,552,444	+				+0.7
1,552,561	+		MMP_RS08250	0.12	-0.1
1,552,681	-		MMP_RS08250	0.21	+0.7
1,552,770	+		MMP_RS08250	0.28	-0.4
1,552,799	-		MMP_RS08250	0.30	+0.1
1,552,863	-		MMP_RS08250	0.35	-0.2
1,552,866	+		MMP_RS08250	0.35	-0.2
1,552,970	+		MMP_RS08250	0.43	-0.1
1,553,125	+		MMP_RS08250	0.54	+0.2
1,553,159	-		MMP_RS08250	0.57	+0.1
1,553,164	+		MMP_RS08250	0.57	+0.1
1,553,193	+		MMP_RS08250	0.59	-0.5