Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1946 and Dsui_1947 are separated by 52 nucleotides Dsui_1947 and Dsui_1948 are separated by 10 nucleotides
Dsui_1946: Dsui_1946 - putative N-acetylglucosaminyl transferase, at 2,057,965 to 2,059,134
_1946
Dsui_1947: Dsui_1947 - nucleotide sugar dehydrogenase, at 2,059,187 to 2,060,512
_1947
Dsui_1948: Dsui_1948 - dTDP-glucose 4,6-dehydratase, at 2,060,523 to 2,061,584
_1948
Position (kb)
2059
2060
2061 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2058.271 kb on - strand, within Dsui_1946 at 2058.321 kb on + strand, within Dsui_1946 at 2058.377 kb on + strand, within Dsui_1946 at 2058.433 kb on + strand, within Dsui_1946 at 2058.470 kb on - strand, within Dsui_1946 at 2058.470 kb on - strand, within Dsui_1946 at 2058.501 kb on + strand, within Dsui_1946 at 2058.501 kb on + strand, within Dsui_1946 at 2058.509 kb on - strand at 2058.638 kb on + strand, within Dsui_1946 at 2058.683 kb on + strand, within Dsui_1946 at 2058.739 kb on + strand, within Dsui_1946 at 2058.811 kb on + strand, within Dsui_1946 at 2058.856 kb on - strand, within Dsui_1946 at 2058.856 kb on - strand, within Dsui_1946 at 2058.936 kb on + strand, within Dsui_1946 at 2059.020 kb on - strand at 2059.037 kb on + strand at 2059.037 kb on + strand at 2059.062 kb on + strand at 2059.070 kb on - strand at 2059.106 kb on - strand at 2059.133 kb on + strand at 2059.137 kb on - strand at 2059.150 kb on + strand at 2059.158 kb on - strand at 2059.158 kb on - strand at 2059.168 kb on - strand at 2059.170 kb on + strand at 2059.215 kb on + strand at 2059.215 kb on + strand at 2059.269 kb on + strand at 2060.241 kb on + strand, within Dsui_1947 at 2060.303 kb on + strand, within Dsui_1947 at 2060.356 kb on + strand, within Dsui_1947 at 2060.415 kb on + strand at 2060.495 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM remove 2,058,271 - Dsui_1946 0.26 -0.1 2,058,321 + Dsui_1946 0.30 -0.1 2,058,377 + Dsui_1946 0.35 -0.3 2,058,433 + Dsui_1946 0.40 -0.2 2,058,470 - Dsui_1946 0.43 -0.1 2,058,470 - Dsui_1946 0.43 +0.9 2,058,501 + Dsui_1946 0.46 +0.1 2,058,501 + Dsui_1946 0.46 -0.2 2,058,509 - +0.9 2,058,638 + Dsui_1946 0.58 -0.4 2,058,683 + Dsui_1946 0.61 +0.2 2,058,739 + Dsui_1946 0.66 -0.1 2,058,811 + Dsui_1946 0.72 +0.2 2,058,856 - Dsui_1946 0.76 -0.1 2,058,856 - Dsui_1946 0.76 -0.1 2,058,936 + Dsui_1946 0.83 -0.5 2,059,020 - -0.7 2,059,037 + +0.1 2,059,037 + -1.3 2,059,062 + +0.2 2,059,070 - -1.1 2,059,106 - -0.1 2,059,133 + +0.4 2,059,137 - -1.7 2,059,150 + +0.2 2,059,158 - -0.1 2,059,158 - -0.7 2,059,168 - +0.9 2,059,170 + +0.2 2,059,215 + -2.7 2,059,215 + -1.4 2,059,269 + -0.7 2,060,241 + Dsui_1947 0.79 -2.3 2,060,303 + Dsui_1947 0.84 -1.3 2,060,356 + Dsui_1947 0.88 -2.9 2,060,415 + -1.7 2,060,495 + -0.5
Or see this region's nucleotide sequence