Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0265 and Dsui_0266 overlap by 35 nucleotides Dsui_0266 and Dsui_0267 are separated by 438 nucleotides
Dsui_0265: Dsui_0265 - signal transduction histidine kinase, at 264,099 to 265,634
_0265
Dsui_0266: Dsui_0266 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 265,600 to 266,283
_0266
Dsui_0267: Dsui_0267 - multidrug resistance efflux pump, at 266,722 to 267,708
_0267
Position (kb) 265
266
267 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 264.679 kb on + strand, within Dsui_0265 at 264.718 kb on + strand, within Dsui_0265 at 264.764 kb on + strand, within Dsui_0265 at 264.813 kb on + strand, within Dsui_0265 at 264.988 kb on + strand, within Dsui_0265 at 265.028 kb on + strand, within Dsui_0265 at 265.041 kb on - strand, within Dsui_0265 at 265.079 kb on + strand, within Dsui_0265 at 265.087 kb on - strand, within Dsui_0265 at 265.104 kb on + strand, within Dsui_0265 at 265.121 kb on + strand, within Dsui_0265 at 265.205 kb on + strand, within Dsui_0265 at 265.264 kb on - strand, within Dsui_0265 at 265.413 kb on + strand at 265.464 kb on + strand, within Dsui_0265 at 265.656 kb on + strand at 265.713 kb on + strand, within Dsui_0266 at 265.713 kb on - strand, within Dsui_0266 at 265.756 kb on - strand, within Dsui_0266 at 265.882 kb on + strand, within Dsui_0266 at 265.896 kb on - strand, within Dsui_0266 at 265.933 kb on - strand, within Dsui_0266 at 265.942 kb on + strand, within Dsui_0266 at 265.986 kb on - strand, within Dsui_0266 at 266.015 kb on + strand, within Dsui_0266 at 266.015 kb on - strand, within Dsui_0266 at 266.023 kb on - strand, within Dsui_0266 at 266.048 kb on + strand, within Dsui_0266 at 266.081 kb on - strand, within Dsui_0266 at 266.132 kb on - strand, within Dsui_0266 at 266.135 kb on + strand at 266.138 kb on - strand, within Dsui_0266 at 266.224 kb on - strand at 266.287 kb on + strand at 266.297 kb on - strand at 266.328 kb on + strand at 266.328 kb on + strand at 266.336 kb on - strand at 266.361 kb on - strand at 266.362 kb on + strand at 266.660 kb on + strand at 266.665 kb on + strand at 266.724 kb on + strand at 266.724 kb on + strand at 266.951 kb on + strand, within Dsui_0267 at 267.149 kb on + strand, within Dsui_0267 at 267.202 kb on + strand, within Dsui_0267 at 267.210 kb on - strand at 267.249 kb on + strand, within Dsui_0267 at 267.249 kb on + strand, within Dsui_0267 at 267.257 kb on - strand, within Dsui_0267 at 267.264 kb on - strand, within Dsui_0267
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM remove 264,679 + Dsui_0265 0.38 -2.0 264,718 + Dsui_0265 0.40 -0.6 264,764 + Dsui_0265 0.43 +0.4 264,813 + Dsui_0265 0.46 -1.2 264,988 + Dsui_0265 0.58 -0.6 265,028 + Dsui_0265 0.60 +0.4 265,041 - Dsui_0265 0.61 -1.0 265,079 + Dsui_0265 0.64 -3.0 265,087 - Dsui_0265 0.64 +0.4 265,104 + Dsui_0265 0.65 +0.4 265,121 + Dsui_0265 0.67 -0.2 265,205 + Dsui_0265 0.72 +0.4 265,264 - Dsui_0265 0.76 +0.4 265,413 + +0.4 265,464 + Dsui_0265 0.89 -0.6 265,656 + +0.4 265,713 + Dsui_0266 0.17 -1.6 265,713 - Dsui_0266 0.17 +0.0 265,756 - Dsui_0266 0.23 -0.8 265,882 + Dsui_0266 0.41 -0.6 265,896 - Dsui_0266 0.43 +0.3 265,933 - Dsui_0266 0.49 -1.2 265,942 + Dsui_0266 0.50 -0.6 265,986 - Dsui_0266 0.56 +0.6 266,015 + Dsui_0266 0.61 -0.6 266,015 - Dsui_0266 0.61 +0.3 266,023 - Dsui_0266 0.62 +0.6 266,048 + Dsui_0266 0.65 -0.6 266,081 - Dsui_0266 0.70 +0.1 266,132 - Dsui_0266 0.78 +0.1 266,135 + +0.4 266,138 - Dsui_0266 0.79 -0.3 266,224 - +0.3 266,287 + -3.2 266,297 - -1.6 266,328 + -1.2 266,328 + +0.4 266,336 - +0.4 266,361 - -3.5 266,362 + +0.4 266,660 + -0.0 266,665 + -0.4 266,724 + -0.1 266,724 + -0.4 266,951 + Dsui_0267 0.23 -0.7 267,149 + Dsui_0267 0.43 -0.2 267,202 + Dsui_0267 0.49 -0.3 267,210 - -0.6 267,249 + Dsui_0267 0.53 +0.0 267,249 + Dsui_0267 0.53 -0.3 267,257 - Dsui_0267 0.54 -1.2 267,264 - Dsui_0267 0.55 -1.2
Or see this region's nucleotide sequence