Experiment: ALP with Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1618 and Dsui_1619 are separated by 176 nucleotides Dsui_1619 and Dsui_1620 are separated by 2 nucleotides Dsui_1620 and Dsui_1621 are separated by 146 nucleotides
Dsui_1618: Dsui_1618 - signal transduction histidine kinase, at 1,699,448 to 1,700,716
_1618
Dsui_1619: Dsui_1619 - putative membrane-associated, metal-dependent hydrolase, at 1,700,893 to 1,702,644
_1619
Dsui_1620: Dsui_1620 - PAP2 (acid phosphatase) superfamily protein, at 1,702,647 to 1,703,414
_1620
Dsui_1621: Dsui_1621 - diacylglycerol kinase, at 1,703,561 to 1,703,932
_1621
Position (kb)
1700
1701
1702
1703 Strain fitness (log2 ratio)
-2
-1
0
1 at 1699.893 kb on - strand at 1699.929 kb on - strand at 1699.971 kb on - strand at 1699.991 kb on - strand, within Dsui_1618 at 1700.048 kb on + strand, within Dsui_1618 at 1700.095 kb on + strand, within Dsui_1618 at 1700.328 kb on - strand at 1700.354 kb on - strand at 1700.374 kb on - strand, within Dsui_1618 at 1700.439 kb on - strand, within Dsui_1618 at 1700.582 kb on - strand at 1700.837 kb on - strand at 1700.972 kb on - strand at 1700.981 kb on - strand at 1701.062 kb on + strand at 1701.070 kb on - strand at 1701.322 kb on - strand at 1701.322 kb on - strand at 1701.350 kb on - strand at 1701.871 kb on + strand, within Dsui_1619 at 1701.921 kb on - strand, within Dsui_1619 at 1702.021 kb on + strand, within Dsui_1619 at 1702.049 kb on + strand, within Dsui_1619 at 1702.049 kb on + strand, within Dsui_1619 at 1702.057 kb on - strand at 1702.122 kb on + strand at 1702.136 kb on - strand, within Dsui_1619 at 1702.250 kb on + strand at 1702.258 kb on - strand, within Dsui_1619 at 1702.287 kb on + strand at 1702.287 kb on + strand at 1702.287 kb on + strand, within Dsui_1619 at 1702.287 kb on + strand at 1702.295 kb on - strand, within Dsui_1619 at 1702.295 kb on - strand, within Dsui_1619 at 1702.370 kb on + strand at 1702.431 kb on - strand at 1702.503 kb on + strand at 1702.625 kb on - strand at 1702.793 kb on + strand at 1703.128 kb on - strand, within Dsui_1620 at 1703.177 kb on + strand, within Dsui_1620 at 1703.220 kb on + strand, within Dsui_1620 at 1703.226 kb on + strand, within Dsui_1620 at 1703.338 kb on + strand at 1703.362 kb on + strand at 1703.416 kb on - strand at 1703.634 kb on + strand, within Dsui_1621
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 1 mM remove 1,699,893 - -0.6 1,699,929 - -0.6 1,699,971 - +0.4 1,699,991 - Dsui_1618 0.43 -1.6 1,700,048 + Dsui_1618 0.47 -1.9 1,700,095 + Dsui_1618 0.51 -0.6 1,700,328 - +0.4 1,700,354 - -0.6 1,700,374 - Dsui_1618 0.73 -1.9 1,700,439 - Dsui_1618 0.78 -1.2 1,700,582 - +0.4 1,700,837 - -0.6 1,700,972 - -1.2 1,700,981 - +0.4 1,701,062 + -2.4 1,701,070 - -0.6 1,701,322 - -0.6 1,701,322 - +0.4 1,701,350 - -0.6 1,701,871 + Dsui_1619 0.56 -0.6 1,701,921 - Dsui_1619 0.59 -1.6 1,702,021 + Dsui_1619 0.64 +0.4 1,702,049 + Dsui_1619 0.66 -2.6 1,702,049 + Dsui_1619 0.66 +0.4 1,702,057 - +0.4 1,702,122 + +0.4 1,702,136 - Dsui_1619 0.71 -1.6 1,702,250 + -0.6 1,702,258 - Dsui_1619 0.78 -1.2 1,702,287 + +0.4 1,702,287 + +0.4 1,702,287 + Dsui_1619 0.80 -1.2 1,702,287 + +0.4 1,702,295 - Dsui_1619 0.80 -1.2 1,702,295 - Dsui_1619 0.80 +0.4 1,702,370 + +0.4 1,702,431 - +0.4 1,702,503 + -1.9 1,702,625 - -0.6 1,702,793 + +0.4 1,703,128 - Dsui_1620 0.63 -1.6 1,703,177 + Dsui_1620 0.69 -1.6 1,703,220 + Dsui_1620 0.75 -1.6 1,703,226 + Dsui_1620 0.75 -1.6 1,703,338 + -1.2 1,703,362 + +0.4 1,703,416 - -1.2 1,703,634 + Dsui_1621 0.20 -1.2
Or see this region's nucleotide sequence