Experiment: Formate McCas no stress control 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS03870 and MMP_RS03875 are separated by 686 nucleotides
MMP_RS03870: MMP_RS03870 - purine NTPase, at 733,128 to 733,808
_RS03870
MMP_RS03875: MMP_RS03875 - hypothetical protein, at 734,495 to 734,872
_RS03875
Position (kb) 734
735 Strain fitness (log2 ratio) -1
0
1 at 733.547 kb on - strand, within MMP_RS03870 at 733.550 kb on + strand, within MMP_RS03870 at 733.566 kb on - strand, within MMP_RS03870 at 733.571 kb on - strand, within MMP_RS03870 at 733.622 kb on + strand, within MMP_RS03870 at 733.855 kb on + strand at 733.941 kb on + strand at 733.964 kb on - strand at 733.976 kb on - strand at 733.986 kb on - strand at 733.986 kb on - strand at 733.987 kb on + strand at 733.997 kb on + strand at 734.102 kb on + strand at 734.108 kb on - strand at 734.170 kb on - strand at 734.171 kb on + strand at 734.174 kb on + strand at 734.174 kb on + strand at 734.218 kb on - strand at 734.239 kb on - strand at 734.277 kb on + strand at 734.281 kb on - strand at 734.281 kb on - strand at 734.286 kb on + strand at 734.292 kb on - strand at 734.392 kb on - strand at 734.393 kb on + strand at 734.409 kb on + strand at 734.413 kb on + strand at 734.497 kb on + strand at 734.498 kb on - strand at 734.818 kb on + strand, within MMP_RS03875 at 734.818 kb on + strand, within MMP_RS03875 at 734.818 kb on + strand, within MMP_RS03875 at 734.818 kb on + strand, within MMP_RS03875 at 734.818 kb on + strand, within MMP_RS03875 at 734.992 kb on + strand at 735.090 kb on + strand at 735.438 kb on + strand at 735.438 kb on + strand at 735.441 kb on + strand at 735.458 kb on + strand at 735.458 kb on + strand at 735.496 kb on + strand at 735.531 kb on + strand at 735.531 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Formate McCas no stress control 1 remove 733,547 - MMP_RS03870 0.62 +0.3 733,550 + MMP_RS03870 0.62 +0.1 733,566 - MMP_RS03870 0.64 -0.2 733,571 - MMP_RS03870 0.65 -0.1 733,622 + MMP_RS03870 0.73 +0.3 733,855 + -0.5 733,941 + -0.2 733,964 - +0.1 733,976 - +0.3 733,986 - +0.4 733,986 - +0.0 733,987 + -0.3 733,997 + -0.7 734,102 + +0.1 734,108 - -0.2 734,170 - -0.1 734,171 + -0.3 734,174 + -0.8 734,174 + +0.6 734,218 - +0.2 734,239 - +0.0 734,277 + -0.5 734,281 - -0.1 734,281 - +0.1 734,286 + -0.2 734,292 - -0.7 734,392 - -0.0 734,393 + -0.3 734,409 + -0.1 734,413 + -0.3 734,497 + -0.4 734,498 - +0.1 734,818 + MMP_RS03875 0.85 -0.3 734,818 + MMP_RS03875 0.85 +0.2 734,818 + MMP_RS03875 0.85 +0.5 734,818 + MMP_RS03875 0.85 +0.1 734,818 + MMP_RS03875 0.85 +0.5 734,992 + +0.8 735,090 + +0.0 735,438 + +0.1 735,438 + +0.5 735,441 + -0.7 735,458 + +0.7 735,458 + -0.5 735,496 + +1.5 735,531 + -0.1 735,531 + +0.2
Or see this region's nucleotide sequence