Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0244 and Dsui_0245 are separated by 1 nucleotides Dsui_0245 and Dsui_0246 overlap by 4 nucleotides Dsui_0246 and Dsui_0248 are separated by 844 nucleotides
Dsui_0244: Dsui_0244 - cell division protein FtsL, at 244,990 to 245,259
_0244
Dsui_0245: Dsui_0245 - S-adenosyl-methyltransferase MraW, at 245,261 to 246,220
_0245
Dsui_0246: Dsui_0246 - mraZ protein, at 246,217 to 246,666
_0246
Dsui_0248: Dsui_0248 - Protein of unknown function (DUF3025), at 247,511 to 248,326
_0248
Position (kb) 246
247 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 245.453 kb on - strand, within Dsui_0245 at 245.486 kb on - strand, within Dsui_0245 at 245.552 kb on - strand, within Dsui_0245 at 246.386 kb on - strand, within Dsui_0246 at 246.527 kb on - strand, within Dsui_0246 at 246.532 kb on - strand, within Dsui_0246 at 246.538 kb on - strand, within Dsui_0246 at 246.625 kb on - strand at 246.690 kb on - strand at 246.728 kb on - strand at 246.753 kb on - strand at 246.984 kb on + strand at 247.026 kb on - strand at 247.072 kb on - strand at 247.518 kb on + strand at 247.518 kb on + strand at 247.521 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 245,453 - Dsui_0245 0.20 -3.8 245,486 - Dsui_0245 0.23 +0.1 245,552 - Dsui_0245 0.30 -2.8 246,386 - Dsui_0246 0.38 -5.1 246,527 - Dsui_0246 0.69 -3.1 246,532 - Dsui_0246 0.70 -2.3 246,538 - Dsui_0246 0.71 -3.1 246,625 - -2.4 246,690 - -4.7 246,728 - -1.7 246,753 - -0.4 246,984 + -1.1 247,026 - -1.2 247,072 - -0.8 247,518 + -0.5 247,518 + -2.3 247,521 - -2.1
Or see this region's nucleotide sequence