Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS25000 and BWI76_RS25005 overlap by 8 nucleotides BWI76_RS25005 and BWI76_RS25010 overlap by 1 nucleotides BWI76_RS25010 and BWI76_RS25015 are separated by 17 nucleotides
BWI76_RS25000: BWI76_RS25000 - malonate decarboxylase acyl carrier protein, at 5,206,851 to 5,207,183
_RS25000
BWI76_RS25005: BWI76_RS25005 - biotin-independent malonate decarboxylase subunit beta, at 5,207,176 to 5,208,105
_RS25005
BWI76_RS25010: BWI76_RS25010 - malonyl-S-acyl carrier protein--biotin carboxyltransferase, at 5,208,105 to 5,208,986
_RS25010
BWI76_RS25015: BWI76_RS25015 - hypothetical protein, at 5,209,004 to 5,210,107
_RS25015
Position (kb) 5208
5209 Strain fitness (log2 ratio) -2
-1
0
1 at 5207.131 kb on + strand, within BWI76_RS25000 at 5207.151 kb on - strand at 5207.296 kb on + strand, within BWI76_RS25005 at 5207.301 kb on + strand, within BWI76_RS25005 at 5207.339 kb on + strand, within BWI76_RS25005 at 5207.347 kb on - strand, within BWI76_RS25005 at 5207.549 kb on - strand, within BWI76_RS25005 at 5207.650 kb on - strand, within BWI76_RS25005 at 5208.002 kb on + strand, within BWI76_RS25005 at 5208.195 kb on - strand, within BWI76_RS25010 at 5208.214 kb on + strand, within BWI76_RS25010 at 5208.235 kb on - strand, within BWI76_RS25010 at 5208.242 kb on + strand, within BWI76_RS25010 at 5208.498 kb on - strand, within BWI76_RS25010 at 5208.576 kb on + strand, within BWI76_RS25010 at 5208.651 kb on + strand, within BWI76_RS25010 at 5208.763 kb on - strand, within BWI76_RS25010 at 5208.784 kb on - strand, within BWI76_RS25010 at 5208.868 kb on + strand, within BWI76_RS25010 at 5208.870 kb on + strand, within BWI76_RS25010 at 5208.986 kb on + strand at 5209.168 kb on - strand, within BWI76_RS25015 at 5209.310 kb on - strand, within BWI76_RS25015 at 5209.342 kb on + strand, within BWI76_RS25015 at 5209.479 kb on + strand, within BWI76_RS25015 at 5209.573 kb on + strand, within BWI76_RS25015 at 5209.692 kb on + strand, within BWI76_RS25015 at 5209.694 kb on - strand, within BWI76_RS25015 at 5209.903 kb on + strand, within BWI76_RS25015 at 5209.923 kb on - strand, within BWI76_RS25015
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 5,207,131 + BWI76_RS25000 0.84 -0.7 5,207,151 - +0.1 5,207,296 + BWI76_RS25005 0.13 -0.6 5,207,301 + BWI76_RS25005 0.13 +0.0 5,207,339 + BWI76_RS25005 0.18 -0.6 5,207,347 - BWI76_RS25005 0.18 -1.4 5,207,549 - BWI76_RS25005 0.40 +0.9 5,207,650 - BWI76_RS25005 0.51 +0.5 5,208,002 + BWI76_RS25005 0.89 -0.3 5,208,195 - BWI76_RS25010 0.10 -0.4 5,208,214 + BWI76_RS25010 0.12 -2.3 5,208,235 - BWI76_RS25010 0.15 +0.1 5,208,242 + BWI76_RS25010 0.16 +0.2 5,208,498 - BWI76_RS25010 0.45 +0.1 5,208,576 + BWI76_RS25010 0.53 +0.7 5,208,651 + BWI76_RS25010 0.62 -0.6 5,208,763 - BWI76_RS25010 0.75 +0.0 5,208,784 - BWI76_RS25010 0.77 +0.3 5,208,868 + BWI76_RS25010 0.87 +0.5 5,208,870 + BWI76_RS25010 0.87 -0.0 5,208,986 + -0.6 5,209,168 - BWI76_RS25015 0.15 -1.1 5,209,310 - BWI76_RS25015 0.28 -0.1 5,209,342 + BWI76_RS25015 0.31 +0.9 5,209,479 + BWI76_RS25015 0.43 -0.3 5,209,573 + BWI76_RS25015 0.52 +0.3 5,209,692 + BWI76_RS25015 0.62 +1.4 5,209,694 - BWI76_RS25015 0.62 +0.1 5,209,903 + BWI76_RS25015 0.81 -0.7 5,209,923 - BWI76_RS25015 0.83 -0.1
Or see this region's nucleotide sequence