Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35720

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,463,496	+				-1.3
3,463,501	-				+0.4
3,463,544	-				-1.0
3,463,702	+		RR42_RS35715	0.24	-0.1
3,463,977	+		RR42_RS35715	0.65	-0.4
3,464,298	+		RR42_RS35720	0.17	+0.3
3,464,298	+		RR42_RS35720	0.17	-1.5
3,464,679	-				+0.6
3,464,942	-		RR42_RS35725	0.73	+0.1
3,464,951	+		RR42_RS35725	0.75	+0.6
3,464,951	+		RR42_RS35725	0.75	+1.6
3,464,951	+		RR42_RS35725	0.75	+0.2
3,465,197	+				+0.7
3,465,197	+				-0.4
3,465,203	-				-0.2
3,465,203	-				+0.6
3,465,203	-				-0.1
3,465,203	-				-1.9
3,465,271	+				-2.1
3,465,271	+				+0.2
3,465,271	+				+0.7
3,465,272	-				-0.5
3,465,272	-				+0.3
3,465,272	-				+0.6
3,465,272	-				-1.3
3,465,272	-				+0.7
3,465,272	-				+0.1
3,465,464	-		RR42_RS35730	0.26	-1.1
3,465,591	+		RR42_RS35730	0.44	-0.1
3,465,592	-		RR42_RS35730	0.44	+0.9
3,465,624	+		RR42_RS35730	0.48	+0.1
3,465,625	-		RR42_RS35730	0.48	+3.2
3,465,627	+		RR42_RS35730	0.49	-0.6
3,465,627	+		RR42_RS35730	0.49	+0.3
3,465,627	+		RR42_RS35730	0.49	-1.0
3,465,627	+		RR42_RS35730	0.49	-0.9
3,465,628	-		RR42_RS35730	0.49	+2.2
3,465,628	-		RR42_RS35730	0.49	+0.5
3,465,628	-		RR42_RS35730	0.49	+0.5