Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13595

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,934,921	+		RR42_RS13585	0.74	-0.5
2,935,073	+				+0.7
2,935,108	+				+0.3
2,935,108	+				+0.4
2,935,108	+				+1.0
2,935,109	-				+0.6
2,935,322	-				+0.1
2,935,328	+				-0.4
2,935,339	+				+0.1
2,935,339	+				+0.0
2,935,407	-				-0.7
2,935,434	+				-0.8
2,935,435	-				-1.5
2,935,554	-				+0.1
2,935,555	+				-0.5
2,935,555	+				-0.8
2,935,555	+				-0.9
2,935,555	+				-0.1
2,935,555	+				+1.5
2,935,555	+				+1.2
2,935,555	+				+1.9
2,935,556	-				+0.9
2,935,556	-				-1.0
2,935,556	-				-1.1
2,935,606	+				-0.3
2,935,607	-				-0.7
2,935,610	+				+1.4
2,935,610	+				-0.5
2,935,610	+				-0.3
2,935,611	-				-0.6
2,935,619	-				+1.1
2,935,666	+				-0.9
2,935,666	+				-1.6
2,935,667	-				-1.8
2,935,719	+				-0.1
2,935,719	+				-0.0
2,935,719	+				+0.3
2,935,719	+				-0.1
2,935,719	+				+0.0
2,935,720	-				+1.4
2,935,720	-				-1.0
2,935,720	-				-0.5
2,935,725	+				+0.5
2,935,725	+				+0.7
2,935,725	+				+0.7
2,935,726	-				-1.0
2,935,726	-				-0.9
2,935,726	-				-1.0
2,935,732	-				+1.1
2,935,732	-				+0.2
2,935,732	-				-1.8
2,935,732	-				+0.8
2,935,806	+		RR42_RS13595	0.24	-1.4
2,935,806	+		RR42_RS13595	0.24	-1.2
2,935,807	-		RR42_RS13595	0.24	+2.5
2,935,993	-		RR42_RS13595	0.79	-0.7
2,936,108	+				-1.0
2,936,108	+				-0.1
2,936,108	+				-0.2
2,936,109	-				-0.7
2,936,115	+				+0.9
2,936,115	+				+0.6
2,936,115	+				+0.1
2,936,116	-				-1.5
2,936,116	-				+0.5
2,936,116	-				-0.2
2,936,122	+				-0.2
2,936,123	-				-0.4
2,936,123	-				-0.2
2,936,130	-				+0.3
2,936,191	+				+0.2
2,936,201	-				+1.4
2,936,353	+		RR42_RS13600	0.27	-0.3
2,936,354	-		RR42_RS13600	0.28	-1.0
2,936,354	-		RR42_RS13600	0.28	+0.6
2,936,375	-		RR42_RS13600	0.31	-0.7
2,936,375	-		RR42_RS13600	0.31	-0.1
2,936,438	-		RR42_RS13600	0.42	-1.3
2,936,479	-		RR42_RS13600	0.49	-0.9
2,936,479	-		RR42_RS13600	0.49	+0.4
2,936,608	+		RR42_RS13600	0.70	-0.6
2,936,608	+		RR42_RS13600	0.70	-0.3
2,936,608	+		RR42_RS13600	0.70	+0.9
2,936,608	+		RR42_RS13600	0.70	-0.6
2,936,609	-		RR42_RS13600	0.71	-1.2
2,936,609	-		RR42_RS13600	0.71	-1.0
2,936,609	-		RR42_RS13600	0.71	+0.2
2,936,784	-				+1.3
2,936,833	-				-1.3
2,936,833	-				+0.8
2,936,842	-				+1.5
2,936,842	-				-0.6
2,937,007	+				+0.2
2,937,008	-				+0.9