Strain Fitness in Shewanella amazonensis SB2B around Sama_3273

Experiment: LB, 30C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB, 30C
3,887,429	-				+0.3
3,887,475	-				+0.2
3,887,486	+				+0.4
3,887,487	-				+0.7
3,887,506	+				+1.1
3,887,506	+				+0.6
3,887,521	-				-0.4
3,887,590	+		Sama_3272	0.18	-0.1
3,887,591	-		Sama_3272	0.18	+1.0
3,887,591	-		Sama_3272	0.18	-0.2
3,887,602	+		Sama_3272	0.20	-1.4
3,887,602	+		Sama_3272	0.20	+0.5
3,887,602	+		Sama_3272	0.20	+0.3
3,887,602	+		Sama_3272	0.20	-0.4
3,887,603	-		Sama_3272	0.20	+0.2
3,887,603	-		Sama_3272	0.20	+0.6
3,887,603	-		Sama_3272	0.20	+1.4
3,887,603	-		Sama_3272	0.20	-1.0
3,887,603	-		Sama_3272	0.20	-0.1
3,887,603	-		Sama_3272	0.20	+0.5
3,887,611	-		Sama_3272	0.22	+0.5
3,887,617	+		Sama_3272	0.23	-1.3
3,887,617	+		Sama_3272	0.23	-1.3
3,887,617	+		Sama_3272	0.23	+0.5
3,887,618	-		Sama_3272	0.23	+0.2
3,887,618	-		Sama_3272	0.23	+0.1
3,887,618	-		Sama_3272	0.23	-0.2
3,887,622	+		Sama_3272	0.23	-1.6
3,887,622	+		Sama_3272	0.23	-1.8
3,887,622	+		Sama_3272	0.23	-0.5
3,887,622	+		Sama_3272	0.23	+1.1
3,887,622	+		Sama_3272	0.23	-0.4
3,887,623	-		Sama_3272	0.24	-0.3
3,887,623	-		Sama_3272	0.24	+0.0
3,887,623	-		Sama_3272	0.24	-2.2
3,887,623	-		Sama_3272	0.24	+0.6
3,887,638	-		Sama_3272	0.26	-0.2
3,887,651	+		Sama_3272	0.28	+1.2
3,887,685	+		Sama_3272	0.34	-0.5
3,887,685	+		Sama_3272	0.34	-1.5
3,887,707	+		Sama_3272	0.38	+0.2
3,887,708	-		Sama_3272	0.38	+0.6
3,887,716	+		Sama_3272	0.39	-0.1
3,887,716	+		Sama_3272	0.39	-1.0
3,887,716	+		Sama_3272	0.39	+0.7
3,887,716	+		Sama_3272	0.39	-0.6
3,887,716	+		Sama_3272	0.39	-2.1
3,887,717	-		Sama_3272	0.40	+1.8
3,887,717	-		Sama_3272	0.40	-0.3
3,887,717	-		Sama_3272	0.40	-0.1
3,887,761	-		Sama_3272	0.47	-1.0
3,887,761	-		Sama_3272	0.47	+1.0
3,887,837	-		Sama_3272	0.60	-1.2
3,887,838	+		Sama_3272	0.60	+1.0
3,887,838	+		Sama_3272	0.60	+0.8
3,887,839	-		Sama_3272	0.61	+0.4
3,887,839	-		Sama_3272	0.61	-1.7
3,887,839	-		Sama_3272	0.61	+0.9
3,887,862	+		Sama_3272	0.64	-1.8
3,887,862	+		Sama_3272	0.64	-1.3
3,887,862	+		Sama_3272	0.64	-0.4
3,887,862	+		Sama_3272	0.64	+1.0
3,887,863	-		Sama_3272	0.65	+0.5
3,887,863	-		Sama_3272	0.65	+0.8
3,887,863	-		Sama_3272	0.65	+0.2
3,887,863	-		Sama_3272	0.65	+1.2
3,887,863	-		Sama_3272	0.65	-1.2
3,887,863	-		Sama_3272	0.65	+0.4
3,887,863	-		Sama_3272	0.65	+0.6
3,887,863	-		Sama_3272	0.65	+0.8
3,887,863	-		Sama_3272	0.65	-1.0
3,887,863	-		Sama_3272	0.65	-0.5
3,887,863	-		Sama_3272	0.65	+1.5
3,887,863	-		Sama_3272	0.65	+0.9
3,888,094	-				-0.1
3,888,094	-				-1.0
3,888,095	+				+0.6
3,888,095	+				-0.8
3,888,096	-				+0.4
3,888,096	-				-0.2
3,888,099	+				+0.5
3,888,099	+				-0.4
3,888,099	+				-0.1
3,888,099	+				-0.2
3,888,099	+				-0.7
3,888,099	+				-0.9
3,888,099	+				-0.1
3,888,099	+				-0.5
3,888,099	+				+0.9
3,888,100	-				-0.2
3,888,100	-				+0.5
3,888,100	-				-0.3
3,888,100	-				-0.0
3,888,100	-				+0.2
3,888,165	+		Sama_3273	0.22	-0.8
3,888,165	+		Sama_3273	0.22	-1.0
3,888,299	+		Sama_3273	0.65	+0.0
3,888,299	+		Sama_3273	0.65	-0.1
3,888,300	-		Sama_3273	0.65	-0.8
3,888,358	+		Sama_3273	0.84	-0.7
3,888,385	+				-1.0
3,888,419	+				-0.1
3,888,419	+				+0.8
3,888,419	+				-1.7
3,888,420	-				+0.0
3,888,420	-				+0.9
3,888,420	-				-1.2
3,888,420	-				-0.3
3,888,420	-				+0.7
3,888,420	-				+0.8
3,888,420	-				+0.8
3,888,469	+				-0.0
3,888,470	-				+0.8
3,888,470	-				+0.8
3,888,470	-				+0.2
3,888,522	+				+0.1
3,888,522	+				-1.0
3,888,522	+				+0.5
3,888,523	-				-0.1
3,888,523	-				+0.9
3,888,525	+				+1.5
3,888,526	-				-1.0
3,888,532	-				+1.0
3,888,532	-				-0.6
3,888,586	+				+2.0
3,888,586	+				-0.0
3,888,587	-				+0.8
3,888,587	-				+0.1
3,888,598	+				-0.4
3,888,599	-				-2.2
3,888,599	-				+0.9
3,888,599	-				+0.9
3,888,599	-				-0.2
3,888,646	+				-1.5
3,888,646	+				+1.3
3,888,647	-				+1.3
3,888,647	-				+0.0
3,888,647	-				-0.8
3,888,805	+				+0.1
3,888,805	+				-0.7
3,888,805	+				-0.4
3,888,805	+				-1.1
3,888,806	-				+0.2
3,888,889	+		Sama_3274	0.14	+0.0
3,888,921	+		Sama_3274	0.16	+0.0
3,888,922	-		Sama_3274	0.16	+0.1
3,888,943	+		Sama_3274	0.18	+0.4
3,888,943	+		Sama_3274	0.18	+0.4
3,888,943	+		Sama_3274	0.18	+0.2
3,888,943	+		Sama_3274	0.18	+0.1
3,888,943	+		Sama_3274	0.18	+0.5
3,888,944	-		Sama_3274	0.18	-0.5
3,888,944	-		Sama_3274	0.18	+0.1
3,888,944	-		Sama_3274	0.18	-0.8
3,888,944	-		Sama_3274	0.18	+0.5
3,888,944	-		Sama_3274	0.18	+0.0
3,888,944	-		Sama_3274	0.18	-0.4
3,889,006	-		Sama_3274	0.22	+0.4
3,889,146	+		Sama_3274	0.32	-1.1
3,889,147	-		Sama_3274	0.32	+0.1
3,889,147	-		Sama_3274	0.32	+0.9
3,889,147	-		Sama_3274	0.32	+0.3
3,889,161	+		Sama_3274	0.33	+1.5
3,889,161	+		Sama_3274	0.33	-0.4
3,889,161	+		Sama_3274	0.33	+1.9
3,889,162	-		Sama_3274	0.33	+0.1
3,889,162	-		Sama_3274	0.33	+0.9
3,889,211	+		Sama_3274	0.36	-0.9
3,889,211	+		Sama_3274	0.36	-0.3
3,889,211	+		Sama_3274	0.36	+1.2
3,889,212	-		Sama_3274	0.36	+0.8
3,889,230	+		Sama_3274	0.38	-0.4
3,889,231	-		Sama_3274	0.38	+1.0
3,889,239	-		Sama_3274	0.38	-0.6
3,889,255	+		Sama_3274	0.39	+0.2
3,889,255	+		Sama_3274	0.39	+0.8
3,889,255	+		Sama_3274	0.39	-0.0
3,889,255	+		Sama_3274	0.39	+1.2
3,889,255	+		Sama_3274	0.39	-0.3
3,889,256	-		Sama_3274	0.40	+0.7
3,889,373	+		Sama_3274	0.48	-0.1
3,889,373	+		Sama_3274	0.48	+1.8
3,889,373	+		Sama_3274	0.48	+0.8
3,889,374	-		Sama_3274	0.48	+0.5
3,889,374	-		Sama_3274	0.48	-2.3
3,889,374	-		Sama_3274	0.48	-1.0
3,889,374	-		Sama_3274	0.48	-0.5
3,889,374	-		Sama_3274	0.48	-0.1
3,889,374	-		Sama_3274	0.48	+0.1
3,889,374	-		Sama_3274	0.48	+0.7