Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3934

Experiment: LB 26C sample1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 26C sample1
4,104,776	+		Psest_3932	0.72	+1.7
4,104,776	+		Psest_3932	0.72	-2.0
4,104,776	+		Psest_3932	0.72	-0.6
4,104,777	-		Psest_3932	0.73	+0.5
4,104,777	-		Psest_3932	0.73	-0.7
4,104,777	-		Psest_3932	0.73	+1.1
4,105,175	-				-0.1
4,105,194	+				-0.9
4,105,194	+				+1.1
4,105,194	+				-0.6
4,105,194	+				+0.1
4,105,194	+				-0.1
4,105,194	+				-1.0
4,105,195	-				+1.1
4,105,195	-				-0.3
4,105,195	-				+0.5
4,105,195	-				+0.1
4,105,195	-				+1.8
4,105,195	-				+0.1
4,105,195	-				-0.5
4,105,195	-				+0.6
4,105,195	-				+0.4
4,105,195	-				+0.3
4,105,195	-				-0.9
4,105,195	-				+0.1
4,105,195	-				-0.4
4,105,195	-				+0.1
4,105,195	-				-1.3
4,105,195	-				+0.6
4,105,233	+				-0.5
4,105,233	+				-1.3
4,105,233	+				+1.0
4,105,233	+				+0.5
4,105,234	-				-0.2
4,105,389	+		Psest_3933	0.33	-0.2
4,105,390	-		Psest_3933	0.33	-0.3
4,105,390	-		Psest_3933	0.33	-0.3
4,105,416	+		Psest_3933	0.39	-0.3
4,105,492	+		Psest_3933	0.59	-0.6
4,105,492	+		Psest_3933	0.59	-0.4
4,105,492	+		Psest_3933	0.59	+0.7
4,105,492	+		Psest_3933	0.59	+0.6
4,105,492	+		Psest_3933	0.59	-1.1
4,105,492	+		Psest_3933	0.59	-1.1
4,105,492	+		Psest_3933	0.59	+0.1
4,105,492	+		Psest_3933	0.59	-0.3
4,105,493	-		Psest_3933	0.59	+0.6
4,105,493	-		Psest_3933	0.59	+0.4
4,105,493	-		Psest_3933	0.59	-1.1
4,105,493	-		Psest_3933	0.59	-2.4
4,105,493	-		Psest_3933	0.59	-2.4
4,105,493	-		Psest_3933	0.59	+0.5
4,105,493	-		Psest_3933	0.59	+0.0
4,105,493	-		Psest_3933	0.59	+0.9
4,105,493	-		Psest_3933	0.59	-1.7
4,105,493	-		Psest_3933	0.59	+1.1
4,105,493	-		Psest_3933	0.59	-1.5
4,105,493	-		Psest_3933	0.59	-0.4
4,105,493	-		Psest_3933	0.59	-1.5
4,105,493	-		Psest_3933	0.59	+0.6
4,105,493	-		Psest_3933	0.59	+0.7
4,105,493	-		Psest_3933	0.59	+0.8
4,105,493	-		Psest_3933	0.59	+1.0
4,105,493	-		Psest_3933	0.59	+2.5
4,105,493	-		Psest_3933	0.59	+2.6
4,105,493	-		Psest_3933	0.59	-0.1
4,105,493	-		Psest_3933	0.59	-0.1
4,105,494	+		Psest_3933	0.59	-0.4
4,105,494	+		Psest_3933	0.59	+0.0
4,105,494	+		Psest_3933	0.59	-0.7
4,105,494	+		Psest_3933	0.59	-0.1
4,105,494	+		Psest_3933	0.59	-0.4
4,105,495	-		Psest_3933	0.59	+0.6
4,105,495	-		Psest_3933	0.59	+0.2
4,105,761	+		Psest_3934	0.11	+0.0
4,105,761	+		Psest_3934	0.11	-1.7
4,105,817	-		Psest_3934	0.23	+0.9
4,105,867	+		Psest_3934	0.33	-0.5
4,105,867	+		Psest_3934	0.33	-0.6
4,105,868	-		Psest_3934	0.33	-2.4
4,105,963	-		Psest_3934	0.53	-0.7
4,106,152	+				+0.9
4,106,152	+				+1.5
4,106,153	-				+1.7
4,106,153	-				-0.1
4,106,196	-				+0.9
4,106,196	-				-0.3
4,106,196	-				-1.1
4,106,339	-				-0.5
4,106,339	-				-0.9
4,106,650	+		Psest_3935	0.16	-1.7
4,106,651	-		Psest_3935	0.16	-1.1
4,106,734	+		Psest_3935	0.19	+0.5
4,106,734	+		Psest_3935	0.19	+1.0
4,106,734	+		Psest_3935	0.19	+1.1
4,106,734	+		Psest_3935	0.19	-1.1
4,106,734	+		Psest_3935	0.19	+0.2
4,106,734	+		Psest_3935	0.19	-0.1
4,106,734	+		Psest_3935	0.19	-1.1
4,106,734	+		Psest_3935	0.19	-1.7
4,106,734	+		Psest_3935	0.19	-1.0
4,106,734	+		Psest_3935	0.19	-0.3
4,106,734	+		Psest_3935	0.19	+0.7
4,106,734	+		Psest_3935	0.19	-1.5
4,106,734	+		Psest_3935	0.19	+0.5
4,106,734	+		Psest_3935	0.19	+1.0
4,106,734	+		Psest_3935	0.19	-0.4
4,106,734	+		Psest_3935	0.19	-0.9
4,106,735	-		Psest_3935	0.19	+0.7
4,106,735	-		Psest_3935	0.19	+2.5
4,106,735	-		Psest_3935	0.19	-0.5
4,106,735	-		Psest_3935	0.19	-0.5
4,106,735	-		Psest_3935	0.19	+1.0
4,106,735	-		Psest_3935	0.19	-0.5
4,106,735	-		Psest_3935	0.19	-0.2
4,106,735	-		Psest_3935	0.19	-1.2
4,106,735	-		Psest_3935	0.19	+0.1
4,106,735	-		Psest_3935	0.19	-0.1
4,106,735	-		Psest_3935	0.19	-2.3
4,106,735	-		Psest_3935	0.19	-1.3
4,106,767	+		Psest_3935	0.20	+2.2
4,106,767	+		Psest_3935	0.20	+0.5
4,106,767	+		Psest_3935	0.20	+0.5
4,106,767	+		Psest_3935	0.20	-1.9
4,106,767	+		Psest_3935	0.20	+3.0
4,106,767	+		Psest_3935	0.20	+1.3
4,106,767	+		Psest_3935	0.20	-1.9
4,106,767	+		Psest_3935	0.20	+0.5
4,106,767	+		Psest_3935	0.20	-2.0
4,106,768	-		Psest_3935	0.21	+2.0
4,106,768	-		Psest_3935	0.21	+1.2
4,106,768	-		Psest_3935	0.21	-2.1
4,106,773	+		Psest_3935	0.21	+0.9
4,106,773	+		Psest_3935	0.21	-0.1
4,106,773	+		Psest_3935	0.21	+0.0
4,106,773	+		Psest_3935	0.21	-0.0
4,106,773	+		Psest_3935	0.21	+1.6
4,106,773	+		Psest_3935	0.21	-0.8
4,106,773	+		Psest_3935	0.21	-1.0
4,106,773	+		Psest_3935	0.21	-1.8
4,106,773	+		Psest_3935	0.21	+0.5
4,106,773	+		Psest_3935	0.21	+1.5
4,106,773	+		Psest_3935	0.21	+0.6
4,106,773	+		Psest_3935	0.21	+0.9
4,106,773	+		Psest_3935	0.21	+1.5
4,106,773	+		Psest_3935	0.21	+0.7
4,106,773	+		Psest_3935	0.21	+0.5
4,106,773	+		Psest_3935	0.21	+2.5
4,106,773	+		Psest_3935	0.21	-1.7
4,106,773	+		Psest_3935	0.21	-1.1
4,106,773	+		Psest_3935	0.21	-0.1
4,106,773	+		Psest_3935	0.21	+0.4
4,106,773	+		Psest_3935	0.21	-0.0
4,106,773	+		Psest_3935	0.21	-1.3
4,106,773	+		Psest_3935	0.21	+2.7
4,106,773	+		Psest_3935	0.21	-0.1
4,106,773	+		Psest_3935	0.21	+0.5
4,106,774	-		Psest_3935	0.21	-0.4
4,106,774	-		Psest_3935	0.21	-2.2
4,106,774	-		Psest_3935	0.21	-0.6
4,106,774	-		Psest_3935	0.21	-1.4
4,106,774	-		Psest_3935	0.21	-0.4
4,106,774	-		Psest_3935	0.21	-0.0
4,106,774	-		Psest_3935	0.21	+0.5
4,106,774	-		Psest_3935	0.21	+0.3
4,106,774	-		Psest_3935	0.21	-0.9
4,106,774	-		Psest_3935	0.21	+0.4
4,106,774	-		Psest_3935	0.21	-1.5
4,106,774	-		Psest_3935	0.21	-0.7
4,106,774	-		Psest_3935	0.21	+0.2
4,106,794	+		Psest_3935	0.22	-0.9
4,106,794	+		Psest_3935	0.22	+1.0