Strain Fitness in Shewanella oneidensis MR-1 around SO2190

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
2,300,548	-		SO2189	0.35	+0.4
2,300,594	+		SO2189	0.38	+0.3
2,300,653	+		SO2189	0.42	-0.7
2,300,796	+		SO2189	0.52	-0.6
2,300,796	+		SO2189	0.52	+0.9
2,300,804	-		SO2189	0.53	-0.5
2,300,804	-		SO2189	0.53	+1.0
2,300,804	-		SO2189	0.53	-0.6
2,300,831	+		SO2189	0.55	+0.7
2,300,909	+		SO2189	0.60	-0.8
2,301,064	+		SO2189	0.71	-0.5
2,301,224	+		SO2189	0.82	+1.7
2,301,592	+	creA	SO2190	0.17	+0.5
2,302,069	+				-0.2
2,302,081	-				-0.6
2,302,103	+				-0.1
2,302,229	+				-0.4
2,302,386	-	metC	SO2191	0.23	-0.1
2,302,463	+	metC	SO2191	0.29	-0.6
2,302,535	+	metC	SO2191	0.35	-0.5
2,302,543	-	metC	SO2191	0.36	+1.3
2,302,543	-	metC	SO2191	0.36	-0.5
2,302,587	+	metC	SO2191	0.40	+0.9
2,302,606	-	metC	SO2191	0.41	-1.9
2,302,637	-	metC	SO2191	0.44	+2.2
2,302,686	-	metC	SO2191	0.48	+0.7
2,302,750	+	metC	SO2191	0.53	+1.3
2,302,750	+	metC	SO2191	0.53	+0.1
2,302,823	-	metC	SO2191	0.59	-0.2
2,302,990	+	metC	SO2191	0.73	+0.8