Strain Fitness in Escherichia coli BW25113 around b1053

Experiment: Ying_Nucleobase14 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 3
1,112,561	-				-0.2
1,112,670	-				+0.1
1,112,866	+	yceK	b1050	0.28	-0.7
1,113,040	+				+2.2
1,113,040	+				+0.7
1,113,311	-	msyB	b1051	0.75	+0.2
1,113,311	-	msyB	b1051	0.75	+0.7
1,113,450	-				+0.1
1,113,524	-				-0.2
1,113,533	+				-0.2
1,113,533	+				+1.3
1,113,665	-				-0.7
1,113,703	-	mdtG	b1053	0.18	+0.2
1,113,816	+	mdtG	b1053	0.27	-0.6
1,113,893	-	mdtG	b1053	0.33	+0.3
1,113,915	+	mdtG	b1053	0.35	-0.3
1,113,915	+	mdtG	b1053	0.35	+0.6
1,114,083	-	mdtG	b1053	0.49	-0.3
1,114,083	-	mdtG	b1053	0.49	+0.2
1,114,104	+	mdtG	b1053	0.50	+0.1
1,114,136	+	mdtG	b1053	0.53	+0.5
1,114,136	+	mdtG	b1053	0.53	-0.4
1,114,274	+	mdtG	b1053	0.64	-0.0
1,114,411	+	mdtG	b1053	0.75	-0.1
1,114,411	+	mdtG	b1053	0.75	+0.7
1,114,437	+	mdtG	b1053	0.77	+0.5
1,114,508	-	mdtG	b1053	0.83	-4.6
1,114,600	-				+0.0
1,114,600	-				-0.0
1,114,703	-				-0.4
1,114,833	+				-0.0
1,114,846	-				+0.1
1,114,889	-				+0.5