Strain Fitness in Escherichia coli BW25113 around b4118

Experiment: Ying_Others16 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 1
4,337,764	-	adiA	b4117	0.66	+0.1
4,337,786	+	adiA	b4117	0.67	-0.9
4,337,786	+	adiA	b4117	0.67	+0.5
4,337,879	-	adiA	b4117	0.71	-0.1
4,338,111	+	adiA	b4117	0.81	+0.8
4,338,119	-	adiA	b4117	0.81	+0.6
4,338,208	-	adiA	b4117	0.85	-1.1
4,338,224	+	adiA	b4117	0.86	+0.1
4,338,224	+	adiA	b4117	0.86	+0.0
4,338,318	-				+0.7
4,338,318	-				+2.2
4,338,350	-				-3.2
4,338,352	-				-0.0
4,338,352	-				-2.3
4,338,401	-				+0.3
4,338,442	+				+0.5
4,338,465	-				-1.4
4,338,465	-				-2.2
4,338,484	-				-1.4
4,338,503	-				+0.9
4,338,511	-				-0.7
4,338,511	-				-1.4
4,338,723	+				-0.7
4,338,901	-	melR	b4118	0.17	-0.5
4,339,019	+	melR	b4118	0.30	-0.6
4,339,030	+	melR	b4118	0.32	+0.2
4,339,030	+	melR	b4118	0.32	-0.5
4,339,346	-	melR	b4118	0.66	-0.5
4,339,376	+	melR	b4118	0.70	-0.6
4,339,376	+	melR	b4118	0.70	-1.0
4,339,421	-	melR	b4118	0.75	-0.3
4,339,427	-	melR	b4118	0.75	-1.3
4,339,434	+	melR	b4118	0.76	-0.2
4,339,501	+	melR	b4118	0.83	-1.2
4,339,549	-	melR	b4118	0.89	-0.5
4,339,625	+				-0.2
4,339,644	+				-0.0
4,339,700	+				+1.2
4,339,700	+				+0.8
4,339,700	-				+0.3
4,339,700	-				+0.4
4,339,734	+				-0.2
4,339,744	-				+0.8
4,339,744	-				-2.2
4,339,755	-				-0.5
4,339,762	+				-0.1
4,340,006	+				+0.8
4,340,060	-				+0.1
4,340,156	+	melA	b4119	0.16	+0.2
4,340,257	-	melA	b4119	0.24	-1.4
4,340,259	+	melA	b4119	0.24	-0.4
4,340,282	-	melA	b4119	0.26	-0.1
4,340,297	-	melA	b4119	0.27	+0.4
4,340,297	-	melA	b4119	0.27	+0.7
4,340,297	-	melA	b4119	0.27	+0.0
4,340,303	+	melA	b4119	0.27	+0.2
4,340,305	+	melA	b4119	0.27	-0.0
4,340,307	+	melA	b4119	0.28	+0.1
4,340,350	+	melA	b4119	0.31	-0.0
4,340,363	-	melA	b4119	0.32	-0.8
4,340,379	+	melA	b4119	0.33	+0.5
4,340,413	-	melA	b4119	0.35	+1.2
4,340,413	-	melA	b4119	0.35	+1.6
4,340,430	+	melA	b4119	0.37	-2.1
4,340,440	+	melA	b4119	0.37	+0.4
4,340,452	-	melA	b4119	0.38	+0.5
4,340,452	-	melA	b4119	0.38	-1.1
4,340,457	-	melA	b4119	0.39	-0.2
4,340,457	-	melA	b4119	0.39	+0.2