Strain Fitness in Escherichia coli BW25113 around b2499

Experiment: Ying_Others16 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 1
2,618,356	+	upp	b2498	0.14	-0.8
2,618,361	-	upp	b2498	0.15	+1.3
2,618,361	-	upp	b2498	0.15	-2.5
2,618,361	-	upp	b2498	0.15	+0.7
2,618,364	-	upp	b2498	0.15	+1.7
2,618,402	+	upp	b2498	0.21	-0.2
2,618,561	+	upp	b2498	0.47	-1.5
2,618,648	+	upp	b2498	0.61	-1.9
2,618,648	+	upp	b2498	0.61	+1.3
2,618,729	-	upp	b2498	0.74	+0.9
2,618,770	+	upp	b2498	0.80	-0.9
2,618,778	-	upp	b2498	0.81	+0.1
2,618,846	+				-1.2
2,618,889	-				-0.8
2,619,127	+				+0.4
2,619,127	+				+0.0
2,619,262	+				-0.5
2,619,284	+				-0.5
2,619,362	+	purM	b2499	0.14	-0.6
2,619,501	-	purM	b2499	0.27	-0.4
2,619,662	+	purM	b2499	0.43	-0.7
2,619,662	+	purM	b2499	0.43	-0.1
2,619,832	+	purM	b2499	0.59	-0.3
2,619,832	+	purM	b2499	0.59	-0.9
2,619,835	-	purM	b2499	0.59	-0.8
2,619,923	-	purM	b2499	0.68	-0.1
2,619,923	-	purM	b2499	0.68	-1.0
2,619,971	-	purM	b2499	0.72	-0.7
2,620,035	+	purM	b2499	0.79	-1.0
2,620,035	+	purM	b2499	0.79	-2.1
2,620,043	-	purM	b2499	0.79	-0.5
2,620,164	+				-1.3
2,620,164	+				+1.8
2,620,164	+				-0.5
2,620,175	+				-0.1
2,620,258	+				-1.1
2,620,258	+				-0.7
2,620,260	+				+0.0
2,620,422	-	purN	b2500	0.26	+0.1
2,620,451	+	purN	b2500	0.31	+1.1
2,620,459	-	purN	b2500	0.32	-0.5
2,620,470	-	purN	b2500	0.33	+0.3
2,620,604	+	purN	b2500	0.54	+0.0
2,620,651	+	purN	b2500	0.62	-0.6
2,620,651	+	purN	b2500	0.62	+0.0
2,620,661	-	purN	b2500	0.63	-0.7
2,620,744	+	purN	b2500	0.76	+0.1
2,620,873	+				-0.3
2,620,873	+				-0.7
2,620,899	-				-0.8
2,620,981	+				+0.2
2,620,981	+				+1.0
2,620,989	-				+0.0
2,620,989	-				+0.2
2,620,998	-				+0.4
2,621,024	-				+0.5
2,621,032	-				-0.5
2,621,041	-				+1.2
2,621,118	-				-1.5